9 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100136352	Actin-1. (410 aa)
	LOC106564005	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
	LOC101448043	IFNc precursor. (187 aa)
	LOC106600963	Interferon a3-like isoform X1. (175 aa)
	LOC101448042	IFNb precursor. (183 aa)
	IL-10	Interleukin-10-like. (123 aa)
	LOC101448041	IFNd precursor. (178 aa)
	LOC100136512	Interleukin-10. (300 aa)
	il18	Interleukin-18. (199 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IL-10	LOC100136352	ENSSSAP00000068333	ENSSSAP00000003534	Interleukin-10-like.	Actin-1.	0.565
IL-10	LOC100136512	ENSSSAP00000068333	ENSSSAP00000080196	Interleukin-10-like.	Interleukin-10.	0.900
IL-10	LOC106564005	ENSSSAP00000068333	ENSSSAP00000016461	Interleukin-10-like.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.565
IL-10	LOC106600963	ENSSSAP00000068333	ENSSSAP00000058571	Interleukin-10-like.	Interferon a3-like isoform X1.	0.517
IL-10	il18	ENSSSAP00000068333	ENSSSAP00000084336	Interleukin-10-like.	Interleukin-18.	0.787
LOC100136352	IL-10	ENSSSAP00000003534	ENSSSAP00000068333	Actin-1.	Interleukin-10-like.	0.565
LOC100136352	LOC100136512	ENSSSAP00000003534	ENSSSAP00000080196	Actin-1.	Interleukin-10.	0.565
LOC100136352	LOC106600963	ENSSSAP00000003534	ENSSSAP00000058571	Actin-1.	Interferon a3-like isoform X1.	0.416
LOC100136512	IL-10	ENSSSAP00000080196	ENSSSAP00000068333	Interleukin-10.	Interleukin-10-like.	0.900
LOC100136512	LOC100136352	ENSSSAP00000080196	ENSSSAP00000003534	Interleukin-10.	Actin-1.	0.565
LOC100136512	LOC106564005	ENSSSAP00000080196	ENSSSAP00000016461	Interleukin-10.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.565
LOC100136512	LOC106600963	ENSSSAP00000080196	ENSSSAP00000058571	Interleukin-10.	Interferon a3-like isoform X1.	0.517
LOC100136512	il18	ENSSSAP00000080196	ENSSSAP00000084336	Interleukin-10.	Interleukin-18.	0.787
LOC101448041	LOC101448043	ENSSSAP00000070149	ENSSSAP00000058521	IFNd precursor.	IFNc precursor.	0.754
LOC101448043	LOC101448041	ENSSSAP00000058521	ENSSSAP00000070149	IFNc precursor.	IFNd precursor.	0.754
LOC106564005	IL-10	ENSSSAP00000016461	ENSSSAP00000068333	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Interleukin-10-like.	0.565
LOC106564005	LOC100136512	ENSSSAP00000016461	ENSSSAP00000080196	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Interleukin-10.	0.565
LOC106564005	LOC106600963	ENSSSAP00000016461	ENSSSAP00000058571	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Interferon a3-like isoform X1.	0.416
LOC106600963	IL-10	ENSSSAP00000058571	ENSSSAP00000068333	Interferon a3-like isoform X1.	Interleukin-10-like.	0.517
LOC106600963	LOC100136352	ENSSSAP00000058571	ENSSSAP00000003534	Interferon a3-like isoform X1.	Actin-1.	0.416