STRINGSTRING
RHO RHO LOC100136941 LOC100136941 rho rho LOC106583538 LOC106583538 opn1sw opn1sw LOC100136370 LOC100136370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RHORhodopsin. (354 aa)
LOC100136941Short wave-sensitive opsin 2. (354 aa)
rhoRhodopsin. (343 aa)
LOC106583538Rhodopsin. (347 aa)
opn1swShort wavelength-sensitive 1 opsin. (334 aa)
LOC100136370Rhodopsin. (354 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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