STRINGSTRING
LOC106583841 LOC106583841 NOTCH1 NOTCH1 LOC106580445 LOC106580445 dlx2 dlx2 lef1 lef1 LOC106573110 LOC106573110 ISL1 ISL1 LGR5 LGR5 ENSSSAP00000019392 ENSSSAP00000019392 six3 six3 PCNA PCNA LOC100136352 LOC100136352 LOC106587666 LOC106587666 LOC106561592 LOC106561592 LOC106579992 LOC106579992 LOC106564005 LOC106564005 LOC106567945 LOC106567945 WNT11 WNT11 LOC100136801 LOC100136801 pitx2 pitx2 LOC106613714 LOC106613714 LOC106603540 LOC106603540 FGF7 FGF7 shh shh lgr5 lgr5 SIX3 SIX3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106583841Homeobox protein BarH-like 1. (248 aa)
NOTCH1Neurogenic locus notch homolog protein 1-like isoform X1. (2522 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
dlx2Homeobox protein DLX-2. (275 aa)
lef1Lymphoid enhancer-binding factor 1 isoform X5. (408 aa)
LOC106573110ALX homeobox protein 1-like. (327 aa)
ISL1Insulin gene enhancer protein ISL-1 isoform X1. (353 aa)
LGR5Leucine-rich repeat-containing G-protein coupled receptor 5-like. (428 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
six3Homeobox protein SIX3. (294 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC100136352Actin-1. (410 aa)
LOC106587666Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (203 aa)
LOC106561592ALX homeobox protein 1-like. (326 aa)
LOC106579992Neurogenic locus notch homolog protein 1-like isoform X1. (2523 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
LOC106567945Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (357 aa)
WNT11Wnt family member 11. (268 aa)
LOC100136801Homeobox protein. (319 aa)
pitx2Homeobox protein. (322 aa)
LOC106613714Forkhead box protein I2-A-like. (404 aa)
LOC106603540Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (357 aa)
FGF7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (139 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (421 aa)
lgr5Leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1. (848 aa)
SIX3Homeobox protein SIX3-like. (294 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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