15 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100136352	Actin-1. (410 aa)
	slc45a2	Membrane-associated transporter protein. (568 aa)
	LOC106564005	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
	prl	Prolactin. (190 aa)
	foxd3	Forkhead box protein D3. (364 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	tshb	Thyrotropin subunit beta; Indispensable for the control of thyroid structure and metabolism. May play some role in the biological processes of the immature fishes. (141 aa)
	LOC106585651	Solute carrier family 2, facilitated glucose transporter member 11-like isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (544 aa)
	LOC100136580	Prolactin isoform X1. (220 aa)
	LOC106580117	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (519 aa)
	LOC106583049	Paired box protein Pax-7-like isoform X6. (501 aa)
	ENSSSAP00000094863	Solute carrier family 45 member 2. (359 aa)
	LOC106565743	Microphthalmia-associated transcription factor-like isoform X1. (506 aa)
	LOC106582858	Microphthalmia-associated transcription factor-like isoform X2. (412 aa)
	LOC106584029	Forkhead box protein D3-B-like. (366 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000094863	LOC106565743	ENSSSAP00000094863	ENSSSAP00000109464	Solute carrier family 45 member 2.	Microphthalmia-associated transcription factor-like isoform X1.	0.505
ENSSSAP00000094863	LOC106580117	ENSSSAP00000094863	ENSSSAP00000073863	Solute carrier family 45 member 2.	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.437
ENSSSAP00000094863	LOC106582858	ENSSSAP00000094863	ENSSSAP00000111272	Solute carrier family 45 member 2.	Microphthalmia-associated transcription factor-like isoform X2.	0.505
ENSSSAP00000094863	LOC106585651	ENSSSAP00000094863	ENSSSAP00000055153	Solute carrier family 45 member 2.	Solute carrier family 2, facilitated glucose transporter member 11-like isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.437
LOC100136580	LOC106609475	ENSSSAP00000063821	ENSSSAP00000040530	Prolactin isoform X1.	Insulin-like growth factor I isoform X1.	0.516
LOC100136580	tshb	ENSSSAP00000063821	ENSSSAP00000050903	Prolactin isoform X1.	Thyrotropin subunit beta; Indispensable for the control of thyroid structure and metabolism. May play some role in the biological processes of the immature fishes.	0.540
LOC106565743	ENSSSAP00000094863	ENSSSAP00000109464	ENSSSAP00000094863	Microphthalmia-associated transcription factor-like isoform X1.	Solute carrier family 45 member 2.	0.505
LOC106565743	LOC106580117	ENSSSAP00000109464	ENSSSAP00000073863	Microphthalmia-associated transcription factor-like isoform X1.	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.669
LOC106565743	LOC106583049	ENSSSAP00000109464	ENSSSAP00000094182	Microphthalmia-associated transcription factor-like isoform X1.	Paired box protein Pax-7-like isoform X6.	0.481
LOC106565743	LOC106584029	ENSSSAP00000109464	ENSSSAP00000119112	Microphthalmia-associated transcription factor-like isoform X1.	Forkhead box protein D3-B-like.	0.763
LOC106565743	LOC106585651	ENSSSAP00000109464	ENSSSAP00000055153	Microphthalmia-associated transcription factor-like isoform X1.	Solute carrier family 2, facilitated glucose transporter member 11-like isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.669
LOC106565743	foxd3	ENSSSAP00000109464	ENSSSAP00000034307	Microphthalmia-associated transcription factor-like isoform X1.	Forkhead box protein D3.	0.763
LOC106565743	slc45a2	ENSSSAP00000109464	ENSSSAP00000013947	Microphthalmia-associated transcription factor-like isoform X1.	Membrane-associated transporter protein.	0.505
LOC106580117	ENSSSAP00000094863	ENSSSAP00000073863	ENSSSAP00000094863	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Solute carrier family 45 member 2.	0.437
LOC106580117	LOC106565743	ENSSSAP00000073863	ENSSSAP00000109464	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Microphthalmia-associated transcription factor-like isoform X1.	0.669
LOC106580117	LOC106582858	ENSSSAP00000073863	ENSSSAP00000111272	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Microphthalmia-associated transcription factor-like isoform X2.	0.669
LOC106580117	LOC106583049	ENSSSAP00000073863	ENSSSAP00000094182	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Paired box protein Pax-7-like isoform X6.	0.499
LOC106580117	LOC106584029	ENSSSAP00000073863	ENSSSAP00000119112	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Forkhead box protein D3-B-like.	0.628
LOC106580117	foxd3	ENSSSAP00000073863	ENSSSAP00000034307	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Forkhead box protein D3.	0.628
LOC106580117	slc45a2	ENSSSAP00000073863	ENSSSAP00000013947	Solute carrier family 2, facilitated glucose transporter member 11-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Membrane-associated transporter protein.	0.437