STRINGSTRING
vim vim s100b s100b LOC106580445 LOC106580445 LOC106573754 LOC106573754 LOC106574292 LOC106574292 LOC106608814 LOC106608814 LOC106577104 LOC106577104 PCNA PCNA ENSSSAP00000019392 ENSSSAP00000019392
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vimVimentin; Belongs to the intermediate filament family. (462 aa)
s100bS100 calcium binding protein, beta (Neural) isoform X1; Belongs to the S-100 family. (115 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC106573754Calretinin-like. (271 aa)
LOC106574292Calcium binding protein beta; Belongs to the S-100 family. (95 aa)
LOC106608814VIP peptides-like. (168 aa)
LOC106577104VIP peptides-like. (170 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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