STRINGSTRING
LOC106560380 LOC106560380 RHCG RHCG pfdn6 pfdn6 rpl3l rpl3l rpl18 rpl18 rbbp4 rbbp4 LOC106607447 LOC106607447 GCF GCF LOC106607888 LOC106607888 npc2 npc2 pmpcb pmpcb LOC106611384 LOC106611384 LOC106565788 LOC106565788 LOC106560797 LOC106560797 ipo5 ipo5 catl1 catl1 LOC106589908 LOC106589908 hmdh hmdh LOC100380688 LOC100380688 LOC106582900 LOC106582900 LOC106573166 LOC106573166 TLN2-2 TLN2-2 LOC106573177 LOC106573177 ENSSSAP00000096172 ENSSSAP00000096172 LOC106566473 LOC106566473 CADPS2 CADPS2 LOC106590208 LOC106590208 LOC106565329 LOC106565329 LOC106578374 LOC106578374 LOC106580895 LOC106580895 LOC100380665 LOC100380665 TLN2 TLN2 cahz cahz LOC106572084 LOC106572084 tsn9 tsn9 ccnt2 ccnt2 LOC106587691 LOC106587691 LOC106561955 LOC106561955 LOC106561982 LOC106561982 LOC106611557 LOC106611557 LOC106570721 LOC106570721 LOC106584518 LOC106584518 LOC106572598 LOC106572598 hmgcr hmgcr LOC106564981 LOC106564981 LOC106572020 LOC106572020 LOC106600890 LOC106600890 LOC106609467 LOC106609467 LOC106569348 LOC106569348 LOC106562413 LOC106562413 mtor mtor rl3 rl3 LOC106586308 LOC106586308 LOC106571603 LOC106571603 LOC106584253 LOC106584253 rad51 rad51 sn25a sn25a rhcg rhcg LOC106595987 LOC106595987 Ccnt1 Ccnt1 atad3 atad3 LOC106592547 LOC106592547 LOC106599341 LOC106599341 LOC106562496 LOC106562496
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106560380Rho GTPase-activating protein 39-like isoform X1. (1055 aa)
RHCGAmmonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (580 aa)
pfdn6Prefoldin subunit 6. (129 aa)
rpl3lRibosomal protein L3-like isoform X1; Belongs to the universal ribosomal protein uL3 family. (409 aa)
rpl1860S ribosomal protein L18. (188 aa)
rbbp4Histone-binding protein RBBP4. (460 aa)
LOC106607447Cathepsin D-like; Belongs to the peptidase A1 family. (424 aa)
GCFGC-rich sequence DNA-binding factor. (566 aa)
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
npc2Epididymal secretory protein E1 precursor. (150 aa)
pmpcbPeptidase, mitochondrial processing beta subunit. (495 aa)
LOC106611384Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
LOC106565788Rho GTPase-activating protein 39-like. (1218 aa)
LOC106560797Cathepsin L1-like; Belongs to the peptidase C1 family. (337 aa)
ipo5Importin-5. (1141 aa)
catl1Cathepsin L1 precursor; Belongs to the peptidase C1 family. (339 aa)
LOC106589908Annexin. (530 aa)
hmdh3-hydroxy-3-methylglutaryl coenzyme A reductase. (902 aa)
LOC100380688Calcium-dependent secretion activator 1 isoform X3. (1347 aa)
LOC106582900Rho GTPase-activating protein 39-like isoform X1. (1476 aa)
LOC106573166cyclin-T2-like isoform X2; Belongs to the cyclin family. (611 aa)
TLN2-2Talin-2-like isoform X2. (2567 aa)
LOC106573177Tetraspanin-9. (346 aa)
ENSSSAP00000096172Talin-2-like. (252 aa)
LOC106566473Rho GTPase-activating protein 39-like isoform X1. (1123 aa)
CADPS2Calcium-dependent secretion activator 2-like. (1281 aa)
LOC106590208Carbonic anhydrase 1-like; Belongs to the alpha-carbonic anhydrase family. (261 aa)
LOC106565329Calcium-dependent secretion activator 1-like isoform X3. (1346 aa)
LOC106578374TRAF2 and NCK-interacting protein kinase-like isoform X4. (1433 aa)
LOC106580895Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
LOC100380665Talin-1 isoform X2. (2558 aa)
TLN2Talin-2 isoform X2. (2561 aa)
cahzCarbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. (262 aa)
LOC106572084Rho GTPase-activating protein 39-like isoform X1. (1101 aa)
tsn9Salmo salar Tetraspanin-9 (tsn9), mRNA. (285 aa)
ccnt2cyclin-T2 isoform X1; Belongs to the cyclin family. (690 aa)
LOC106587691Aminopeptidase. (939 aa)
LOC106561955Cathepsin L1-like; Belongs to the peptidase C1 family. (230 aa)
LOC106561982Cathepsin L1-like; Belongs to the peptidase C1 family. (341 aa)
LOC106611557Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (620 aa)
LOC106570721Histone-binding protein RBBP4-like. (466 aa)
LOC106584518Cathepsin D-like; Belongs to the peptidase A1 family. (343 aa)
LOC106572598cyclin-T1-like isoform X2; Belongs to the cyclin family. (668 aa)
hmgcr3-hydroxy-3-methylglutaryl coenzyme A reductase. (898 aa)
LOC106564981Cathepsin L1-like; Belongs to the peptidase C1 family. (370 aa)
LOC106572020ATPase family AAA domain-containing protein 3-like. (888 aa)
LOC106600890Cathepsin D-like; Belongs to the peptidase A1 family. (414 aa)
LOC106609467Tetraspanin-9-like. (269 aa)
LOC106569348Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC106562413Talin-2-like. (1811 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2569 aa)
rl360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
LOC106586308cyclin-T2-like; Belongs to the cyclin family. (704 aa)
LOC106571603Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
LOC106584253Cathepsin L1-like; Belongs to the peptidase C1 family. (355 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
sn25aSynaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
rhcgAmmonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (516 aa)
LOC106595987V-type proton ATPase subunit H-like. (290 aa)
Ccnt1Cyclin T1. (486 aa)
atad3ATPase family AAA domain-containing protein 3 isoform X1. (701 aa)
LOC106592547Cathepsin D-like; Belongs to the peptidase A1 family. (410 aa)
LOC106599341Carbonic anhydrase-like; Belongs to the alpha-carbonic anhydrase family. (274 aa)
LOC106562496Cathepsin D-like; Belongs to the peptidase A1 family. (348 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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