STRINGSTRING
ATG7 ATG7 LOC106611470 LOC106611470 LOC106605021 LOC106605021 PPP6C-2 PPP6C-2 LOC100136450 LOC100136450 LOC106612902 LOC106612902 LOC106572383 LOC106572383 LOC106584161 LOC106584161 LOC106589227 LOC106589227 il18 il18 LOC106567785 LOC106567785 LOC106604267 LOC106604267 LOC106607744 LOC106607744 mmp13 mmp13 ar ar LOC106567248 LOC106567248 pink1 pink1 TAB2 TAB2 LOC106602581 LOC106602581 irf7 irf7 becn1 becn1 LOC106563563 LOC106563563 tlr13 tlr13 blm blm LOC106579045 LOC106579045 LOC106604777 LOC106604777 LOC100316613 LOC100316613 LOC106601367 LOC106601367 LOC106600843 LOC106600843 LOC106590795 LOC106590795 LOC100136559 LOC100136559 PLD4 PLD4 esr1 esr1 LOC106611214 LOC106611214 LOC106607210 LOC106607210 LOC106592102 LOC106592102 LOC100136459 LOC100136459 LOC106587003 LOC106587003 LOC106581183 LOC106581183 LOC100380772 LOC100380772 LOC106567640 LOC106567640 ENSSSAP00000049389 ENSSSAP00000049389 LOC106608297 LOC106608297 LOC106613337 LOC106613337 LOC106563281 LOC106563281 LOC106600963 LOC106600963 LOC106604392 LOC106604392 LOC106571057 LOC106571057 atg5 atg5 LOC106566344 LOC106566344 LOC106570475 LOC106570475 foxp3 foxp3 LOC106612106 LOC106612106
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (664 aa)
LOC106611470Mitochondrial antiviral-signaling protein-like isoform X1. (555 aa)
LOC106605021Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
PPP6C-2Serine/threonine-protein phosphatase. (306 aa)
LOC100136450CD8 alpha precursor. (226 aa)
LOC106612902Caspase-1-like; Belongs to the peptidase C14A family. (383 aa)
LOC106572383wiskott-Aldrich syndrome protein homolog. (509 aa)
LOC106584161Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106589227Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (263 aa)
il18Interleukin-18. (199 aa)
LOC106567785Androgen receptor beta 1. (855 aa)
LOC106604267Androgen receptor-like. (696 aa)
LOC106607744TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X5. (869 aa)
mmp13Collagenase 3 precursor. (689 aa)
arAndrogen receptor isoform X1. (853 aa)
LOC106567248Wiskott-Aldrich syndrome protein homolog. (506 aa)
pink1Serine/threonine-protein kinase PINK1, mitochondrial. (576 aa)
TAB2TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1. (808 aa)
LOC106602581Lectin-like. (246 aa)
irf7Interferon regulatory factor 7. (415 aa)
becn1Beclin-1 isoform X1. (485 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
tlr13Toll-like receptor 22b; Belongs to the Toll-like receptor family. (962 aa)
blmBloom syndrome protein isoform X1. (1471 aa)
LOC106579045Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (252 aa)
LOC106604777Toll-like receptor 6. (837 aa)
LOC100316613Interferon promoter stimulating protein 1 isoform X1. (606 aa)
LOC106601367Interleukin-17A/F2 isoform a. (149 aa)
LOC106600843interleukin-17F-like. (170 aa)
LOC106590795Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
PLD4Phospholipase D4-like. (519 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (622 aa)
LOC106611214interleukin-17A-like. (152 aa)
LOC106607210DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1527 aa)
LOC106592102WD repeat domain phosphoinositide-interacting protein 2. (132 aa)
LOC100136459Caspase 8-like protein. (499 aa)
LOC106587003Surfeit locus protein 4-like. (298 aa)
LOC106581183Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
LOC100380772DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1531 aa)
LOC106567640Histone H2A; Belongs to the histone H2A family. (128 aa)
ENSSSAP00000049389Argonaute RISC catalytic component 2. (871 aa)
LOC106608297Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106563281Surfeit locus protein 4. (316 aa)
LOC106600963Interferon a3-like isoform X1. (175 aa)
LOC106604392Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
LOC106571057interleukin-17F-like. (193 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
LOC106566344Interleukin-1 receptor-associated kinase 1-like isoform X1. (752 aa)
LOC106570475Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (893 aa)
foxp3Forkhead box P3 isoform X1. (446 aa)
LOC106612106Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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