47 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106564005	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
	SLC1A3	Amino acid transporter. (543 aa)
	LOC106562888	Amino acid transporter. (373 aa)
	LOC106601550	Amino acid transporter. (739 aa)
	LOC100136352	Actin-1. (410 aa)
	plcb2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1293 aa)
	slc1a2	Amino acid transporter. (570 aa)
	slc1a7	Amino acid transporter. (530 aa)
	casr	Extracellular calcium-sensing receptor isoform X1. (941 aa)
	LOC106573978	Amino acid transporter. (596 aa)
	LOC106613701	Amino acid transporter. (561 aa)
	LOC106607530	Peptide YY. (97 aa)
	LOC106576428	Guanine nucleotide-binding protein G(I) subunit alpha-1-like. (437 aa)
	LOC106600499	Amino acid transporter. (575 aa)
	LOC106587903	Amino acid transporter. (548 aa)
	LOC100380647	Guanine nucleotide-binding protein G(I) subunit alpha-1. (382 aa)
	LOC106608636	Amino acid transporter. (522 aa)
	stc1	Stanniocalcin-1. (256 aa)
	ghrl	Preproghrelin-2 precursor. (108 aa)
	LOC106613596	Amino acid transporter. (575 aa)
	slc1a4	Amino acid transporter. (534 aa)
	LOC106560428	Amino acid transporter. (583 aa)
	ENSSSAP00000051673	G-protein coupled receptor family C group 6 member A-like. (786 aa)
	LOC106579594	G-protein coupled receptor family C group 6 member A-like. (892 aa)
	pyy	Peptide YY. (152 aa)
	LOC106578324	Peptide Y-like. (106 aa)
	LOC106585585	Stanniocalcin-like isoform X1. (253 aa)
	LOC106572092	Inositol 1,4,5-trisphosphate receptor type 3-like. (2680 aa)
	trpm5	Transient receptor potential cation channel subfamily M member 5. (165 aa)
	LOC106577598	Amino acid transporter. (529 aa)
	LOC106565959	Taste receptor type 1 member 3-like. (885 aa)
	LOC106579383	Peptide Y-like. (106 aa)
	plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1255 aa)
	LOC106605539	G-protein coupled receptor family C group 6 member A-like. (928 aa)
	SLC1A3-2	Amino acid transporter. (540 aa)
	LOC106565476	Inositol 1,4,5-trisphosphate receptor type 1 isoform X1. (2720 aa)
	LOC106607535	G-protein coupled receptor family C group 6 member A-like; Belongs to the G-protein coupled receptor 3 family. (856 aa)
	LOC106573551	Amino acid transporter. (578 aa)
	alb1	Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. (658 aa)
	LOC106583048	Taste receptor type 1 member 3-like. (911 aa)
	EEF1A1	Eukaryotic translation elongation factor 1 alpha 1. (494 aa)
	LOC106570911	Serum albumin 2-like. (608 aa)
	LOC106585918	Amino acid transporter. (536 aa)
	LOC106573351	Amino acid transporter. (575 aa)
	LOC106562564	Amino acid transporter. (518 aa)
	LOC106574477	Amino acid transporter. (551 aa)
	ITPR1	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1. (2721 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEF1A1	LOC100136352	ENSSSAP00000099404	ENSSSAP00000003534	Eukaryotic translation elongation factor 1 alpha 1.	Actin-1.	0.570
EEF1A1	LOC100380647	ENSSSAP00000099404	ENSSSAP00000024162	Eukaryotic translation elongation factor 1 alpha 1.	Guanine nucleotide-binding protein G(I) subunit alpha-1.	0.470
EEF1A1	LOC106564005	ENSSSAP00000099404	ENSSSAP00000016461	Eukaryotic translation elongation factor 1 alpha 1.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.570
EEF1A1	LOC106576428	ENSSSAP00000099404	ENSSSAP00000015060	Eukaryotic translation elongation factor 1 alpha 1.	Guanine nucleotide-binding protein G(I) subunit alpha-1-like.	0.470
ENSSSAP00000051673	LOC100380647	ENSSSAP00000051673	ENSSSAP00000024162	G-protein coupled receptor family C group 6 member A-like.	Guanine nucleotide-binding protein G(I) subunit alpha-1.	0.686
ENSSSAP00000051673	LOC106572092	ENSSSAP00000051673	ENSSSAP00000064000	G-protein coupled receptor family C group 6 member A-like.	Inositol 1,4,5-trisphosphate receptor type 3-like.	0.572
ENSSSAP00000051673	LOC106576428	ENSSSAP00000051673	ENSSSAP00000015060	G-protein coupled receptor family C group 6 member A-like.	Guanine nucleotide-binding protein G(I) subunit alpha-1-like.	0.686
ENSSSAP00000051673	LOC106578324	ENSSSAP00000051673	ENSSSAP00000060848	G-protein coupled receptor family C group 6 member A-like.	Peptide Y-like.	0.429
ENSSSAP00000051673	LOC106579383	ENSSSAP00000051673	ENSSSAP00000077915	G-protein coupled receptor family C group 6 member A-like.	Peptide Y-like.	0.420
ENSSSAP00000051673	LOC106607530	ENSSSAP00000051673	ENSSSAP00000014829	G-protein coupled receptor family C group 6 member A-like.	Peptide YY.	0.439
ENSSSAP00000051673	plcb2	ENSSSAP00000051673	ENSSSAP00000006417	G-protein coupled receptor family C group 6 member A-like.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.826
ENSSSAP00000051673	plcb4	ENSSSAP00000051673	ENSSSAP00000082127	G-protein coupled receptor family C group 6 member A-like.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.799
ENSSSAP00000051673	pyy	ENSSSAP00000051673	ENSSSAP00000059087	G-protein coupled receptor family C group 6 member A-like.	Peptide YY.	0.441
ITPR1	LOC100380647	ENSSSAP00000117773	ENSSSAP00000024162	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1.	Guanine nucleotide-binding protein G(I) subunit alpha-1.	0.499
ITPR1	LOC106576428	ENSSSAP00000117773	ENSSSAP00000015060	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1.	Guanine nucleotide-binding protein G(I) subunit alpha-1-like.	0.499
ITPR1	plcb2	ENSSSAP00000117773	ENSSSAP00000006417	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.636
ITPR1	plcb4	ENSSSAP00000117773	ENSSSAP00000082127	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.641
ITPR1	trpm5	ENSSSAP00000117773	ENSSSAP00000067999	Inositol 1,4,5-trisphosphate receptor type 1-like isoform X1.	Transient receptor potential cation channel subfamily M member 5.	0.658
LOC100136352	EEF1A1	ENSSSAP00000003534	ENSSSAP00000099404	Actin-1.	Eukaryotic translation elongation factor 1 alpha 1.	0.570
LOC100136352	LOC106570911	ENSSSAP00000003534	ENSSSAP00000099721	Actin-1.	Serum albumin 2-like.	0.545