17 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100136450	CD8 alpha precursor. (226 aa)
	LOC101448031	Interleukin; Belongs to the IL-15/IL-21 family. (215 aa)
	ENSSSAP00000014815	Microsomal glutathione S-transferase 1-like. (212 aa)
	LOC106575060	Microsomal glutathione S-transferase 1-like. (85 aa)
	LOC106596454	Interleukin; Belongs to the IL-15/IL-21 family. (177 aa)
	LOC106590880	Microsomal glutathione S-transferase 1-like. (155 aa)
	PTGES3	Prostaglandin E synthase 3-like isoform X1. (233 aa)
	LOC100136451	CD8 beta precursor. (214 aa)
	LOC106600963	Interferon a3-like isoform X1. (175 aa)
	LOC106571940	Prostaglandin E synthase 3-like isoform X1. (160 aa)
	LOC106566721	Prostaglandin E synthase 3-like. (192 aa)
	LOC106580769	Interleukin; Belongs to the IL-15/IL-21 family. (153 aa)
	LOC100136426	Vitellogenin. (1672 aa)
	il4/13a	Interleukin 4/13A precursor. (142 aa)
	nccrp1	Non-specific Cytotoxic Cell receptor protein-1. (233 aa)
	LOC106610234	Interleukin; Belongs to the IL-15/IL-21 family. (227 aa)
	LOC106567008	Prostaglandin E synthase 3-like. (217 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000014815	LOC106566721	ENSSSAP00000014815	ENSSSAP00000077406	Microsomal glutathione S-transferase 1-like.	Prostaglandin E synthase 3-like.	0.545
ENSSSAP00000014815	LOC106567008	ENSSSAP00000014815	ENSSSAP00000118112	Microsomal glutathione S-transferase 1-like.	Prostaglandin E synthase 3-like.	0.545
ENSSSAP00000014815	LOC106571940	ENSSSAP00000014815	ENSSSAP00000075017	Microsomal glutathione S-transferase 1-like.	Prostaglandin E synthase 3-like isoform X1.	0.748
ENSSSAP00000014815	LOC106575060	ENSSSAP00000014815	ENSSSAP00000014819	Microsomal glutathione S-transferase 1-like.	Microsomal glutathione S-transferase 1-like.	0.654
ENSSSAP00000014815	LOC106590880	ENSSSAP00000014815	ENSSSAP00000032691	Microsomal glutathione S-transferase 1-like.	Microsomal glutathione S-transferase 1-like.	0.658
ENSSSAP00000014815	PTGES3	ENSSSAP00000014815	ENSSSAP00000034738	Microsomal glutathione S-transferase 1-like.	Prostaglandin E synthase 3-like isoform X1.	0.543
LOC100136450	LOC100136451	ENSSSAP00000077139	ENSSSAP00000042706	CD8 alpha precursor.	CD8 beta precursor.	0.991
LOC100136450	LOC101448031	ENSSSAP00000077139	ENSSSAP00000007895	CD8 alpha precursor.	Interleukin; Belongs to the IL-15/IL-21 family.	0.506
LOC100136450	LOC106580769	ENSSSAP00000077139	ENSSSAP00000091777	CD8 alpha precursor.	Interleukin; Belongs to the IL-15/IL-21 family.	0.506
LOC100136450	LOC106596454	ENSSSAP00000077139	ENSSSAP00000022069	CD8 alpha precursor.	Interleukin; Belongs to the IL-15/IL-21 family.	0.506
LOC100136450	LOC106610234	ENSSSAP00000077139	ENSSSAP00000106582	CD8 alpha precursor.	Interleukin; Belongs to the IL-15/IL-21 family.	0.506
LOC100136450	il4/13a	ENSSSAP00000077139	ENSSSAP00000102212	CD8 alpha precursor.	Interleukin 4/13A precursor.	0.497
LOC100136450	nccrp1	ENSSSAP00000077139	ENSSSAP00000104316	CD8 alpha precursor.	Non-specific Cytotoxic Cell receptor protein-1.	0.513
LOC100136451	LOC100136450	ENSSSAP00000042706	ENSSSAP00000077139	CD8 beta precursor.	CD8 alpha precursor.	0.991
LOC100136451	nccrp1	ENSSSAP00000042706	ENSSSAP00000104316	CD8 beta precursor.	Non-specific Cytotoxic Cell receptor protein-1.	0.652
LOC101448031	LOC100136450	ENSSSAP00000007895	ENSSSAP00000077139	Interleukin; Belongs to the IL-15/IL-21 family.	CD8 alpha precursor.	0.506
LOC101448031	LOC106600963	ENSSSAP00000007895	ENSSSAP00000058571	Interleukin; Belongs to the IL-15/IL-21 family.	Interferon a3-like isoform X1.	0.559
LOC106566721	ENSSSAP00000014815	ENSSSAP00000077406	ENSSSAP00000014815	Prostaglandin E synthase 3-like.	Microsomal glutathione S-transferase 1-like.	0.545
LOC106566721	LOC106567008	ENSSSAP00000077406	ENSSSAP00000118112	Prostaglandin E synthase 3-like.	Prostaglandin E synthase 3-like.	0.903
LOC106566721	LOC106571940	ENSSSAP00000077406	ENSSSAP00000075017	Prostaglandin E synthase 3-like.	Prostaglandin E synthase 3-like isoform X1.	0.901