STRINGSTRING
LOC106611163 LOC106611163 LOC106560445 LOC106560445 LOC100136352 LOC100136352 LOC106600848 LOC106600848 LOC106601367 LOC106601367 stmn4 stmn4 LOC106600843 LOC106600843 gpn1 gpn1 GCF GCF LOC106585043 LOC106585043 LOC106563563 LOC106563563 khk khk insm2 insm2 ralgapa1 ralgapa1 LOC106609047 LOC106609047 mcm3 mcm3 INSM2 INSM2 LOC106611173 LOC106611173 traf2 traf2 LOC106571034 LOC106571034 elp3 elp3 paqr8 paqr8 LOC106608315 LOC106608315 il11 il11 LOC106607297 LOC106607297 LOC106592035 LOC106592035 LOC106564005 LOC106564005 LOC106601025 LOC106601025
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106611163Stathmin; Belongs to the stathmin family. (176 aa)
LOC106560445Breast cancer metastasis-suppressor 1 homolog isoform X2. (257 aa)
LOC100136352Actin-1. (410 aa)
LOC106600848Membrane progestin receptor beta-like. (347 aa)
LOC106601367Interleukin-17A/F2 isoform a. (149 aa)
stmn4Stathmin; Belongs to the stathmin family. (175 aa)
LOC106600843interleukin-17F-like. (170 aa)
gpn1GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. (448 aa)
GCFGC-rich sequence DNA-binding factor. (566 aa)
LOC106585043TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (566 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
khkKetohexokinase isoform X1. (347 aa)
insm2Insulinoma-associated protein 2. (556 aa)
ralgapa1Ral GTPase-activating protein subunit alpha-1 isoform X1. (2603 aa)
LOC106609047Liver-expressed antimicrobial peptide 2-like. (99 aa)
mcm3DNA helicase; Belongs to the MCM family. (813 aa)
INSM2INSM transcriptional repressor 2. (489 aa)
LOC106611173Ral GTPase-activating protein subunit alpha-1-like isoform X4. (2545 aa)
traf2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (519 aa)
LOC106571034Stathmin-4-like. (388 aa)
elp3Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (559 aa)
paqr8Membrane progestin receptor beta. (357 aa)
LOC106608315Zygotic DNA replication licensing factor mcm3-like. (385 aa)
il11Interleukin-11 isoform X1. (247 aa)
LOC106607297Signal transducer and activator of transcription 3-like. (808 aa)
LOC106592035TNF receptor-associated factor 6-like. (367 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
LOC106601025Signal transducer and activator of transcription. (802 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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