STRINGSTRING
LOC106585784 LOC106585784 CSF1R-3 CSF1R-3 LOC100136439 LOC100136439 LOC106566838 LOC106566838 LOC106608297 LOC106608297 cxcr3 cxcr3 CXCR3 CXCR3 LOC106605554 LOC106605554 LOC106570581 LOC106570581 LOC106613337 LOC106613337 stat4 stat4 LOC106579144 LOC106579144 LOC106604392 LOC106604392 LOC106566669 LOC106566669 crem crem LOC100136479 LOC100136479 LOC106578794 LOC106578794 LOC106578808 LOC106578808 LOC106578934 LOC106578934 ENSSSAP00000063779 ENSSSAP00000063779 LOC106591903 LOC106591903 LOC106581291 LOC106581291 LOC106612106 LOC106612106 PABPC4 PABPC4 LOC106586142 LOC106586142 CSF1R-4 CSF1R-4 LOC106586145 LOC106586145 atp5g3 atp5g3 LOC106613740 LOC106613740 LOC106605021 LOC106605021 LOC106566669-2 LOC106566669-2 STAT2 STAT2 LOC106584161 LOC106584161 LOC106589227 LOC106589227 LOC106566651 LOC106566651 CCL19 CCL19 tl/lrr tl/lrr LOC106566983 LOC106566983 LOC106602581 LOC106602581 IRF-7B IRF-7B itgav itgav LOC106573350 LOC106573350 LOC106604570 LOC106604570 irf7 irf7 LOC100136446 LOC100136446 LOC100136558 LOC100136558 bgn bgn LOC106573364 LOC106573364 LOC106579428 LOC106579428 LOC106586700 LOC106586700 TAPBP TAPBP rnf14 rnf14 LOC106580502 LOC106580502 fgfr2 fgfr2 sept8 sept8 LOC106563563 LOC106563563 LOC106577089 LOC106577089 LOC106579045 LOC106579045 LOC106585111 LOC106585111 LOC106567004 LOC106567004 LOC106569552 LOC106569552 LOC106578553 LOC106578553 mmp19 mmp19 LOC106590795 LOC106590795 LOC100136559 LOC100136559 GCF GCF LOC106578531 LOC106578531 LOC106565855 LOC106565855 CSF1R CSF1R sta5b sta5b LOC106601025 LOC106601025 LOC106561308 LOC106561308 CSF1R-2 CSF1R-2 ef1a1 ef1a1 LOC106572039 LOC106572039 sesn1 sesn1 LOC106592035 LOC106592035 LOC106607295 LOC106607295 m3k8 m3k8 LOC106563358 LOC106563358 LOC106562692 LOC106562692 LOC106573597 LOC106573597 LOC106573600 LOC106573600 LOC106584348 LOC106584348 LOC106612323 LOC106612323 LOC106606913 LOC106606913 tnfrsf6b tnfrsf6b LOC106570793 LOC106570793 TLR5 TLR5 GPX7 GPX7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106585784TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (572 aa)
CSF1R-3Macrophage colony-stimulating factor 1 receptor 1-like isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (988 aa)
LOC100136439Cathelicidin antimicrobial peptide isoform X2. (232 aa)
LOC106566838Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (371 aa)
LOC106608297Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
cxcr3C-X-C chemokine receptor type 3-like; Belongs to the G-protein coupled receptor 1 family. (376 aa)
CXCR3C-X-C chemokine receptor type 3-like; Belongs to the G-protein coupled receptor 1 family. (377 aa)
LOC106605554C-X-C chemokine receptor type 3-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (382 aa)
LOC106570581Interleukin-6 isoform A. (222 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
stat4Signal transducer and activator of transcription. (744 aa)
LOC106579144Signal transducer and activator of transcription. (799 aa)
LOC106604392Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
LOC10656666960S ribosomal protein L32. (138 aa)
cremcAMP-responsive element modulator isoform X1. (420 aa)
LOC100136479CD83 antigen isoform X2. (229 aa)
LOC106578794C-X-C chemokine receptor type 3-like; Belongs to the G-protein coupled receptor 1 family. (380 aa)
LOC106578808C-X-C chemokine receptor type 3-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (408 aa)
LOC106578934C-X-C chemokine receptor type 3-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (386 aa)
ENSSSAP00000063779NADH:ubiquinone oxidoreductase core subunit S7. (209 aa)
LOC106591903Polyadenylate-binding protein 1-like. (278 aa)
LOC106581291CD83 antigen-like. (217 aa)
LOC106612106Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (653 aa)
LOC106586142Signal transducer and activator of transcription. (747 aa)
CSF1R-4Macrophage colony stimulating factor receptor-like protein isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (970 aa)
LOC106586145Signal transducer and activator of transcription. (718 aa)
atp5g3Cyclic AMP-dependent transcription factor ATF-2 isoform X2. (501 aa)
LOC106613740Cold-inducible RNA-binding protein B-like isoform X1. (206 aa)
LOC106605021Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106566669-260S ribosomal protein L32. (135 aa)
STAT2Signal transducer and activator of transcription. (811 aa)
LOC106584161Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106589227Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (263 aa)
LOC106566651Embryonic polyadenylate-binding protein-like isoform X1. (689 aa)
CCL19C-C motif chemokine. (122 aa)
tl/lrrToll-like receptor 5. (688 aa)
LOC106566983Mitogen-activated protein kinase. (361 aa)
LOC106602581Lectin-like. (246 aa)
IRF-7BInterferon regulatory factor 7B. (492 aa)
itgavIntegrin alpha-V; Belongs to the integrin alpha chain family. (1046 aa)
LOC106573350CD44 antigen-like. (472 aa)
LOC106604570Calnexin-like isoform X1. (639 aa)
irf7Interferon regulatory factor 7. (415 aa)
LOC100136446C type lectin receptor A. (255 aa)
LOC100136558Signal transducer and activator of transcription. (773 aa)
bgnBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (446 aa)
LOC106573364Polyadenylate-binding protein 1-A-like. (183 aa)
LOC106579428Fibroblast growth factor receptor. (846 aa)
LOC106586700Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
TAPBPTAP binding protein. (442 aa)
rnf14RBR-type E3 ubiquitin transferase. (466 aa)
LOC106580502Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (316 aa)
fgfr2Fibroblast growth factor receptor 2. (892 aa)
sept8Septin-8 isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (477 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106577089Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (288 aa)
LOC106579045Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family. (252 aa)
LOC106585111Cholesterol 25-hydroxylase-like protein isoform X1; Belongs to the sterol desaturase family. (299 aa)
LOC106567004Signal transducer and activator of transcription. (799 aa)
LOC106569552Cold-inducible RNA-binding protein B-like isoform X2. (200 aa)
LOC106578553Mitogen-activated protein kinase kinase kinase 8-like. (475 aa)
mmp19Matrix metalloproteinase-19. (484 aa)
LOC106590795Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
GCFGC-rich sequence DNA-binding factor. (566 aa)
LOC106578531Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (639 aa)
LOC106565855C-C motif chemokine 19-like. (107 aa)
CSF1RMacrophage colony-stimulating factor 1 receptor 1-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (978 aa)
sta5bSignal transducer and activator of transcription. (786 aa)
LOC106601025Signal transducer and activator of transcription. (802 aa)
LOC106561308CD44 antigen-like. (470 aa)
CSF1R-2Macrophage colony-stimulating factor 1 receptor 1-like isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1091 aa)
ef1a1Salmo salar Elongation factor 1-alpha 1 (ef1a1), mRNA. (475 aa)
LOC106572039Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (377 aa)
sesn1Sestrin-1 isoform X1. (549 aa)
LOC106592035TNF receptor-associated factor 6-like. (367 aa)
LOC106607295Signal transducer and activator of transcription. (784 aa)
m3k8Mitogen-activated protein kinase kinase kinase 8. (472 aa)
LOC106563358C-C motif chemokine 19-like. (108 aa)
LOC106562692TNF receptor-associated factor 6-like. (377 aa)
LOC106573597Cold-inducible RNA-binding protein B-like isoform X5. (211 aa)
LOC106573600Cold-inducible RNA-binding protein B-like isoform X3. (177 aa)
LOC106584348RBR-type E3 ubiquitin transferase. (818 aa)
LOC106612323Calnexin-like. (382 aa)
LOC106606913Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (602 aa)
tnfrsf6bTumor necrosis factor receptor superfamily member 6B. (287 aa)
LOC106570793Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (631 aa)
TLR5Toll-like receptor 5; Belongs to the Toll-like receptor family. (658 aa)
GPX7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (184 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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