28 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	xkr4	XK-related protein. (614 aa)
	commd7	COMM domain-containing protein 7. (239 aa)
	bhlhe22	Class E basic helix-loop-helix protein 22. (234 aa)
	LOC106572879	Tripartite motif-containing protein 54-like isoform X1. (558 aa)
	dlgap2	Disks large-associated protein 2 isoform X1. (1030 aa)
	UCKL1	Uridine-cytidine kinase; Belongs to the uridine kinase family. (556 aa)
	uckl1-2	Uridine-cytidine kinase; Belongs to the uridine kinase family. (549 aa)
	ucn	Urocortin. (165 aa)
	LOC106571441	Tripartite motif-containing protein 54-like isoform X2. (362 aa)
	sulf1	Extracellular sulfatase Sulf-1 isoform X2. (1369 aa)
	Dlgap4	DLG associated protein 4. (488 aa)
	BHLHE22	Class E basic helix-loop-helix protein 22-like. (226 aa)
	LOC106571368	Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2-like isoform X1. (208 aa)
	nkain2	Sodium/potassium transporting ATPase interacting 2. (212 aa)
	LOC106590392	Class E basic helix-loop-helix protein 22-like. (250 aa)
	eya1	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (330 aa)
	LOC106579715	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (275 aa)
	LOC106600432	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1386 aa)
	uckl1	Uridine-cytidine kinase; Belongs to the uridine kinase family. (545 aa)
	CRFB2	Interleukin-10 receptor subunit beta-like. (534 aa)
	LOC106600876	Corticotropin-releasing factor receptor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family. (444 aa)
	tshb	Thyrotropin subunit beta; Indispensable for the control of thyroid structure and metabolism. May play some role in the biological processes of the immature fishes. (141 aa)
	LOC106579536	Class E basic helix-loop-helix protein 22-like. (250 aa)
	LOC106607456	Corticotropin-releasing factor receptor 1 isoform X2; Belongs to the G-protein coupled receptor 2 family. (434 aa)
	XKR6	XK-related protein. (448 aa)
	LOC106570052	Phosphatidate phosphatase LPIN1-like isoform X1. (969 aa)
	LOC106610734	Phosphatidate phosphatase LPIN1-like isoform X5. (1044 aa)
	DLGAP4	Disks large-associated protein 4-like isoform X3. (1112 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106600876	ucn	ENSSSAP00000050778	ENSSSAP00000098781	Corticotropin-releasing factor receptor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	Urocortin.	0.971
LOC106607456	ucn	ENSSSAP00000051576	ENSSSAP00000098781	Corticotropin-releasing factor receptor 1 isoform X2; Belongs to the G-protein coupled receptor 2 family.	Urocortin.	0.729
ucn	LOC106600876	ENSSSAP00000098781	ENSSSAP00000050778	Urocortin.	Corticotropin-releasing factor receptor 1-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.971
ucn	LOC106607456	ENSSSAP00000098781	ENSSSAP00000051576	Urocortin.	Corticotropin-releasing factor receptor 1 isoform X2; Belongs to the G-protein coupled receptor 2 family.	0.729