12 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106571739	Bone morphogenetic protein 2-like. (426 aa)
	LOC106612383	Bone morphogenetic protein 2-like isoform X1. (491 aa)
	LOC106595857	Angiotensin-converting enzyme. (477 aa)
	LOC106578314	Angiotensin-converting enzyme. (1325 aa)
	bglap	Osteocalcin precursor. (101 aa)
	IL-10	Interleukin-10-like. (123 aa)
	LOC106579262	Angiotensin-converting enzyme. (1294 aa)
	LOC106569623	Bone morphogenetic protein 2-like. (387 aa)
	LOC106579050	Bone morphogenetic protein 2-like. (395 aa)
	LOC100136512	Interleukin-10. (300 aa)
	ace2	Angiotensin-converting enzyme. (742 aa)
	bmp2	Bone morphogenetic protein 2 precursor. (422 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IL-10	LOC100136512	ENSSSAP00000068333	ENSSSAP00000080196	Interleukin-10-like.	Interleukin-10.	0.900
LOC100136512	IL-10	ENSSSAP00000080196	ENSSSAP00000068333	Interleukin-10.	Interleukin-10-like.	0.900
LOC106569623	bglap	ENSSSAP00000075322	ENSSSAP00000067700	Bone morphogenetic protein 2-like.	Osteocalcin precursor.	0.671
LOC106571739	bglap	ENSSSAP00000095002	ENSSSAP00000067700	Bone morphogenetic protein 2-like.	Osteocalcin precursor.	0.620
LOC106579050	bglap	ENSSSAP00000075353	ENSSSAP00000067700	Bone morphogenetic protein 2-like.	Osteocalcin precursor.	0.698
LOC106612383	bglap	ENSSSAP00000050741	ENSSSAP00000067700	Bone morphogenetic protein 2-like isoform X1.	Osteocalcin precursor.	0.605
bglap	LOC106569623	ENSSSAP00000067700	ENSSSAP00000075322	Osteocalcin precursor.	Bone morphogenetic protein 2-like.	0.671
bglap	LOC106571739	ENSSSAP00000067700	ENSSSAP00000095002	Osteocalcin precursor.	Bone morphogenetic protein 2-like.	0.620
bglap	LOC106579050	ENSSSAP00000067700	ENSSSAP00000075353	Osteocalcin precursor.	Bone morphogenetic protein 2-like.	0.698
bglap	LOC106612383	ENSSSAP00000067700	ENSSSAP00000050741	Osteocalcin precursor.	Bone morphogenetic protein 2-like isoform X1.	0.605
bglap	bmp2	ENSSSAP00000067700	ENSSSAP00000089322	Osteocalcin precursor.	Bone morphogenetic protein 2 precursor.	0.550
bmp2	bglap	ENSSSAP00000089322	ENSSSAP00000067700	Bone morphogenetic protein 2 precursor.	Osteocalcin precursor.	0.550