STRINGSTRING
LOC100136509 LOC100136509 GPX2 GPX2 LOC100136352 LOC100136352 ctrl ctrl LOC100136559 LOC100136559 LOC106564005 LOC106564005 PCNA PCNA PPARA PPARA ENSSSAP00000019392 ENSSSAP00000019392 LOC106596058 LOC106596058 LOC106602722 LOC106602722 LOC106577309 LOC106577309 LOC106578230 LOC106578230 LOC106610306 LOC106610306 GPX7 GPX7 CASP6 CASP6 LOC106613337 LOC106613337 LOC100194734 LOC100194734 gpx8 gpx8 LOC106566059 LOC106566059 LOC106580445 LOC106580445 IL-10 IL-10 LOC106612297 LOC106612297 PPARA-2 PPARA-2 LOC100136512 LOC100136512 LOC106612018 LOC106612018 casp9 casp9 LOC106567147 LOC106567147 LOC106570901 LOC106570901 LOC106563563 LOC106563563 casp3 casp3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100136509Tumor necrosis factor alpha. (244 aa)
GPX2Glutathione peroxidase; Belongs to the glutathione peroxidase family. (244 aa)
LOC100136352Actin-1. (410 aa)
ctrlHeat shock protein 70 isoform 3; Belongs to the heat shock protein 70 family. (656 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
PPARAPeroxisome proliferator-activated receptor alpha isoform X1. (477 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
LOC106596058Glutathione peroxidase; Belongs to the glutathione peroxidase family. (134 aa)
LOC106602722Caspase-3-like; Belongs to the peptidase C14A family. (284 aa)
LOC106577309Glutathione peroxidase; Belongs to the glutathione peroxidase family. (134 aa)
LOC106578230Caspase-6-like; Belongs to the peptidase C14A family. (319 aa)
LOC106610306Caspase-6-like isoform X1; Belongs to the peptidase C14A family. (301 aa)
GPX7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (184 aa)
CASP6Caspase-6-like isoform X1; Belongs to the peptidase C14A family. (321 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC100194734Glutathione peroxidase; Belongs to the glutathione peroxidase family. (193 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (265 aa)
LOC106566059Glutathione peroxidase; Belongs to the glutathione peroxidase family. (141 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
IL-10Interleukin-10-like. (123 aa)
LOC106612297Glutathione peroxidase; Belongs to the glutathione peroxidase family. (177 aa)
PPARA-2Peroxisome proliferator-activated receptor alpha-like. (479 aa)
LOC100136512Interleukin-10. (300 aa)
LOC106612018Caspase-3-like; Belongs to the peptidase C14A family. (283 aa)
casp9Caspase-9 isoform X1; Belongs to the peptidase C14A family. (450 aa)
LOC106567147Caspase-9-like; Belongs to the peptidase C14A family. (456 aa)
LOC106570901Glutathione peroxidase; Belongs to the glutathione peroxidase family. (215 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
casp3Caspase 3B; Belongs to the peptidase C14A family. (311 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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