16 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106610234	Interleukin; Belongs to the IL-15/IL-21 family. (227 aa)
	LOC106560421	Alanine aminotransferase 2-like isoform X1. (506 aa)
	LOC106587295	Alanine aminotransferase 2-like isoform X2. (569 aa)
	LOC106573756	Aspartate aminotransferase. (427 aa)
	nos1	Nitric oxide synthase; Produces nitric oxide (NO). (1477 aa)
	GPT	Alanine aminotransferase 2-like isoform X1. (994 aa)
	LOC106580769	Interleukin; Belongs to the IL-15/IL-21 family. (153 aa)
	alat2	Alanine aminotransferase 2-like. (562 aa)
	nos2	Nitric oxide synthase; Produces nitric oxide (NO). (1162 aa)
	LOC106590406	Alanine aminotransferase 2-like isoform X1. (1057 aa)
	got1	Aspartate aminotransferase. (411 aa)
	GOT1	Aspartate aminotransferase. (421 aa)
	LOC101448031	Interleukin; Belongs to the IL-15/IL-21 family. (215 aa)
	LOC106587404	Aspartate aminotransferase. (428 aa)
	LOC106596454	Interleukin; Belongs to the IL-15/IL-21 family. (177 aa)
	LOC106600424	Alanine aminotransferase 2-like isoform X1. (562 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOT1	GPT	ENSSSAP00000002839	ENSSSAP00000087913	Aspartate aminotransferase.	Alanine aminotransferase 2-like isoform X1.	0.743
GOT1	LOC106560421	ENSSSAP00000002839	ENSSSAP00000045053	Aspartate aminotransferase.	Alanine aminotransferase 2-like isoform X1.	0.719
GOT1	LOC106573756	ENSSSAP00000002839	ENSSSAP00000073703	Aspartate aminotransferase.	Aspartate aminotransferase.	0.847
GOT1	LOC106587295	ENSSSAP00000002839	ENSSSAP00000070798	Aspartate aminotransferase.	Alanine aminotransferase 2-like isoform X2.	0.738
GOT1	LOC106587404	ENSSSAP00000002839	ENSSSAP00000018745	Aspartate aminotransferase.	Aspartate aminotransferase.	0.847
GOT1	LOC106590406	ENSSSAP00000002839	ENSSSAP00000117236	Aspartate aminotransferase.	Alanine aminotransferase 2-like isoform X1.	0.738
GOT1	LOC106600424	ENSSSAP00000002839	ENSSSAP00000037132	Aspartate aminotransferase.	Alanine aminotransferase 2-like isoform X1.	0.738
GOT1	alat2	ENSSSAP00000002839	ENSSSAP00000097913	Aspartate aminotransferase.	Alanine aminotransferase 2-like.	0.738
GOT1	got1	ENSSSAP00000002839	ENSSSAP00000001889	Aspartate aminotransferase.	Aspartate aminotransferase.	0.604
GPT	GOT1	ENSSSAP00000087913	ENSSSAP00000002839	Alanine aminotransferase 2-like isoform X1.	Aspartate aminotransferase.	0.743
GPT	LOC106560421	ENSSSAP00000087913	ENSSSAP00000045053	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like isoform X1.	0.901
GPT	LOC106573756	ENSSSAP00000087913	ENSSSAP00000073703	Alanine aminotransferase 2-like isoform X1.	Aspartate aminotransferase.	0.763
GPT	LOC106587295	ENSSSAP00000087913	ENSSSAP00000070798	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like isoform X2.	0.900
GPT	LOC106587404	ENSSSAP00000087913	ENSSSAP00000018745	Alanine aminotransferase 2-like isoform X1.	Aspartate aminotransferase.	0.763
GPT	LOC106590406	ENSSSAP00000087913	ENSSSAP00000117236	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like isoform X1.	0.900
GPT	LOC106600424	ENSSSAP00000087913	ENSSSAP00000037132	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like isoform X1.	0.900
GPT	alat2	ENSSSAP00000087913	ENSSSAP00000097913	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like.	0.900
GPT	got1	ENSSSAP00000087913	ENSSSAP00000001889	Alanine aminotransferase 2-like isoform X1.	Aspartate aminotransferase.	0.743
LOC106560421	GOT1	ENSSSAP00000045053	ENSSSAP00000002839	Alanine aminotransferase 2-like isoform X1.	Aspartate aminotransferase.	0.719
LOC106560421	GPT	ENSSSAP00000045053	ENSSSAP00000087913	Alanine aminotransferase 2-like isoform X1.	Alanine aminotransferase 2-like isoform X1.	0.901