22 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106579390	Nucleotide-binding oligomerization domain-containing protein 1-like. (960 aa)
	TLR-2	Toll-like receptor 13. (572 aa)
	IL-10	Interleukin-10-like. (123 aa)
	LOC106605511	Nucleotide-binding oligomerization domain-containing protein 1-like. (954 aa)
	LOC100136512	Interleukin-10. (300 aa)
	mmp9	Matrix metalloproteinase-9 precursor. (698 aa)
	LOC106608814	VIP peptides-like. (168 aa)
	alb1	Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. (658 aa)
	LOC106570911	Serum albumin 2-like. (608 aa)
	LOC106602581	Lectin-like. (246 aa)
	LOC106577104	VIP peptides-like. (170 aa)
	nod2	Nucleotide-binding oligomerization domain-containing protein 2 isoform X1. (1002 aa)
	tlr9	Toll-like receptor 9 isoform X1; Belongs to the Toll-like receptor family. (1074 aa)
	BCL2	Apoptosis regulator Bcl-2-like. (230 aa)
	LOC106601025	Signal transducer and activator of transcription. (802 aa)
	sod1	Superoxide dismutase, Cu-Zn family. (227 aa)
	LOC106607297	Signal transducer and activator of transcription 3-like. (808 aa)
	ef1b	Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family. (222 aa)
	LOC106575720	Elongation factor 1-beta-like; Belongs to the EF-1-beta/EF-1-delta family. (222 aa)
	LOC106562391	LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 2-like. (852 aa)
	LOC106566399	Matrix metalloproteinase-9-like. (707 aa)
	LOC106570581	Interleukin-6 isoform A. (222 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IL-10	LOC100136512	ENSSSAP00000068333	ENSSSAP00000080196	Interleukin-10-like.	Interleukin-10.	0.900
IL-10	LOC106562391	ENSSSAP00000068333	ENSSSAP00000040048	Interleukin-10-like.	LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 2-like.	0.416
IL-10	LOC106566399	ENSSSAP00000068333	ENSSSAP00000042830	Interleukin-10-like.	Matrix metalloproteinase-9-like.	0.650
IL-10	LOC106570581	ENSSSAP00000068333	ENSSSAP00000053478	Interleukin-10-like.	Interleukin-6 isoform A.	0.627
IL-10	LOC106570911	ENSSSAP00000068333	ENSSSAP00000099721	Interleukin-10-like.	Serum albumin 2-like.	0.441
IL-10	LOC106579390	ENSSSAP00000068333	ENSSSAP00000055834	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 1-like.	0.732
IL-10	LOC106601025	ENSSSAP00000068333	ENSSSAP00000007429	Interleukin-10-like.	Signal transducer and activator of transcription.	0.654
IL-10	LOC106605511	ENSSSAP00000068333	ENSSSAP00000074582	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 1-like.	0.732
IL-10	LOC106607297	ENSSSAP00000068333	ENSSSAP00000021394	Interleukin-10-like.	Signal transducer and activator of transcription 3-like.	0.624
IL-10	TLR-2	ENSSSAP00000068333	ENSSSAP00000063294	Interleukin-10-like.	Toll-like receptor 13.	0.586
IL-10	alb1	ENSSSAP00000068333	ENSSSAP00000093436	Interleukin-10-like.	Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood.	0.441
IL-10	mmp9	ENSSSAP00000068333	ENSSSAP00000088286	Interleukin-10-like.	Matrix metalloproteinase-9 precursor.	0.650
IL-10	nod2	ENSSSAP00000068333	ENSSSAP00000104635	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 2 isoform X1.	0.416
IL-10	tlr9	ENSSSAP00000068333	ENSSSAP00000106992	Interleukin-10-like.	Toll-like receptor 9 isoform X1; Belongs to the Toll-like receptor family.	0.641
LOC100136512	IL-10	ENSSSAP00000080196	ENSSSAP00000068333	Interleukin-10.	Interleukin-10-like.	0.900
LOC100136512	LOC106562391	ENSSSAP00000080196	ENSSSAP00000040048	Interleukin-10.	LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 2-like.	0.416
LOC100136512	LOC106566399	ENSSSAP00000080196	ENSSSAP00000042830	Interleukin-10.	Matrix metalloproteinase-9-like.	0.650
LOC100136512	LOC106570581	ENSSSAP00000080196	ENSSSAP00000053478	Interleukin-10.	Interleukin-6 isoform A.	0.627
LOC100136512	LOC106570911	ENSSSAP00000080196	ENSSSAP00000099721	Interleukin-10.	Serum albumin 2-like.	0.441
LOC100136512	LOC106579390	ENSSSAP00000080196	ENSSSAP00000055834	Interleukin-10.	Nucleotide-binding oligomerization domain-containing protein 1-like.	0.560