38 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	irf1	Interferon regulatory factor. (334 aa)
	ENSSSAP00000061950	Signal transducer and activator of transcription 1a. (710 aa)
	IL-10	Interleukin-10-like. (123 aa)
	LOC106586145	Signal transducer and activator of transcription. (718 aa)
	LOC106607218	Tyrosine-protein kinase. (1197 aa)
	irf9	Interferon regulatory factor 9 isoform X1. (430 aa)
	LOC100136512	Interleukin-10. (300 aa)
	STAT2	Signal transducer and activator of transcription. (811 aa)
	LOC106580769	Interleukin; Belongs to the IL-15/IL-21 family. (153 aa)
	LOC106574287	NGFI-A-binding protein 1-like. (501 aa)
	il21	Interleukin-21. (141 aa)
	gdf-8-2	Myostatin 1b precursor. (373 aa)
	irf7	Interferon regulatory factor 7. (415 aa)
	LOC106610234	Interleukin; Belongs to the IL-15/IL-21 family. (227 aa)
	LOC100136558	Signal transducer and activator of transcription. (773 aa)
	ifih1	Interferon-induced helicase C domain-containing protein 1 isoform X1. (1002 aa)
	LOC106567004	Signal transducer and activator of transcription. (799 aa)
	LOC100286690	Tyrosine-protein kinase. (1172 aa)
	LOC106601025	Signal transducer and activator of transcription. (802 aa)
	LOC101448031	Interleukin; Belongs to the IL-15/IL-21 family. (215 aa)
	jak2	Tyrosine-protein kinase. (1180 aa)
	LOC106607297	Signal transducer and activator of transcription 3-like. (808 aa)
	LOC106596454	Interleukin; Belongs to the IL-15/IL-21 family. (177 aa)
	LOC106565979	Cytokine-inducible SH2-containing protein-like isoform X1. (234 aa)
	jak1	Tyrosine-protein kinase. (1162 aa)
	TYK2	Tyrosine-protein kinase. (1176 aa)
	jak3	Tyrosine-protein kinase. (1113 aa)
	LOC106566745	Interferon regulatory factor 4-like. (417 aa)
	ENSSSAP00000043297	NGFI-A binding protein 1a (EGR1 binding protein 1). (471 aa)
	irf-3	Interferon regulatory factor 3 isoform X1. (482 aa)
	LOC106567112	Tyrosine-protein kinase. (553 aa)
	LOC106572626	Tyrosine-protein kinase. (540 aa)
	slc40a1	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (577 aa)
	LOC106570581	Interleukin-6 isoform A. (222 aa)
	wdr75	WD repeat-containing protein 75 isoform X2. (829 aa)
	stat4	Signal transducer and activator of transcription. (744 aa)
	LOC106586140	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (573 aa)
	LOC106586141	WD repeat-containing protein 75-like isoform X2. (830 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000061950	LOC100286690	ENSSSAP00000061950	ENSSSAP00000119383	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.684
ENSSSAP00000061950	LOC106567004	ENSSSAP00000061950	ENSSSAP00000118040	Signal transducer and activator of transcription 1a.	Signal transducer and activator of transcription.	0.544
ENSSSAP00000061950	LOC106567112	ENSSSAP00000061950	ENSSSAP00000047229	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.464
ENSSSAP00000061950	LOC106572626	ENSSSAP00000061950	ENSSSAP00000049248	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.464
ENSSSAP00000061950	LOC106601025	ENSSSAP00000061950	ENSSSAP00000007429	Signal transducer and activator of transcription 1a.	Signal transducer and activator of transcription.	0.491
ENSSSAP00000061950	LOC106607218	ENSSSAP00000061950	ENSSSAP00000071508	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.716
ENSSSAP00000061950	LOC106607297	ENSSSAP00000061950	ENSSSAP00000021394	Signal transducer and activator of transcription 1a.	Signal transducer and activator of transcription 3-like.	0.492
ENSSSAP00000061950	STAT2	ENSSSAP00000061950	ENSSSAP00000081094	Signal transducer and activator of transcription 1a.	Signal transducer and activator of transcription.	0.487
ENSSSAP00000061950	TYK2	ENSSSAP00000061950	ENSSSAP00000032281	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.716
ENSSSAP00000061950	ifih1	ENSSSAP00000061950	ENSSSAP00000113258	Signal transducer and activator of transcription 1a.	Interferon-induced helicase C domain-containing protein 1 isoform X1.	0.439
ENSSSAP00000061950	irf-3	ENSSSAP00000061950	ENSSSAP00000045878	Signal transducer and activator of transcription 1a.	Interferon regulatory factor 3 isoform X1.	0.488
ENSSSAP00000061950	irf1	ENSSSAP00000061950	ENSSSAP00000064347	Signal transducer and activator of transcription 1a.	Interferon regulatory factor.	0.573
ENSSSAP00000061950	irf7	ENSSSAP00000061950	ENSSSAP00000105615	Signal transducer and activator of transcription 1a.	Interferon regulatory factor 7.	0.411
ENSSSAP00000061950	jak1	ENSSSAP00000061950	ENSSSAP00000031778	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.684
ENSSSAP00000061950	jak2	ENSSSAP00000061950	ENSSSAP00000020319	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.662
ENSSSAP00000061950	jak3	ENSSSAP00000061950	ENSSSAP00000039380	Signal transducer and activator of transcription 1a.	Tyrosine-protein kinase.	0.732
IL-10	LOC100136512	ENSSSAP00000068333	ENSSSAP00000080196	Interleukin-10-like.	Interleukin-10.	0.900
IL-10	LOC100136558	ENSSSAP00000068333	ENSSSAP00000106651	Interleukin-10-like.	Signal transducer and activator of transcription.	0.573
IL-10	LOC101448031	ENSSSAP00000068333	ENSSSAP00000007895	Interleukin-10-like.	Interleukin; Belongs to the IL-15/IL-21 family.	0.702
IL-10	LOC106567004	ENSSSAP00000068333	ENSSSAP00000118040	Interleukin-10-like.	Signal transducer and activator of transcription.	0.769