14 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106602581	Lectin-like. (246 aa)
	LOC100136502	CD4-like protein isoform 1 precursor. (523 aa)
	cd3e	CD3epsilon isoform 1 precursor. (181 aa)
	LOC106613845	Tyrosine-protein kinase. (613 aa)
	LOC100136501	Hemicentin-1 isoform X1. (512 aa)
	mfap4	Microfibrillar-associated protein 4 precursor. (240 aa)
	ENSSSAP00000019392	Proliferating cell nuclear antigen. (218 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	rag2	V(D)J recombination-activating protein 2. (533 aa)
	galt	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (371 aa)
	lck	Tyrosine-protein kinase. (509 aa)
	LOC106580445	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	LOC106584369	Tyrosine-protein kinase. (633 aa)
	lck-2	Tyrosine-protein kinase. (527 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106580445	PCNA	ENSSSAP00000068146	ENSSSAP00000018360	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.900
LOC106584369	cd3e	ENSSSAP00000066882	ENSSSAP00000106855	Tyrosine-protein kinase.	CD3epsilon isoform 1 precursor.	0.988
LOC106584369	lck	ENSSSAP00000066882	ENSSSAP00000006589	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.784
LOC106584369	lck-2	ENSSSAP00000066882	ENSSSAP00000072663	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.786
LOC106584369	rag2	ENSSSAP00000066882	ENSSSAP00000009083	Tyrosine-protein kinase.	V(D)J recombination-activating protein 2.	0.714
LOC106613845	cd3e	ENSSSAP00000023443	ENSSSAP00000106855	Tyrosine-protein kinase.	CD3epsilon isoform 1 precursor.	0.991
LOC106613845	lck	ENSSSAP00000023443	ENSSSAP00000006589	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.783
LOC106613845	lck-2	ENSSSAP00000023443	ENSSSAP00000072663	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.784
LOC106613845	rag2	ENSSSAP00000023443	ENSSSAP00000009083	Tyrosine-protein kinase.	V(D)J recombination-activating protein 2.	0.714
PCNA	LOC106580445	ENSSSAP00000018360	ENSSSAP00000068146	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.900
cd3e	LOC106584369	ENSSSAP00000106855	ENSSSAP00000066882	CD3epsilon isoform 1 precursor.	Tyrosine-protein kinase.	0.988
cd3e	LOC106613845	ENSSSAP00000106855	ENSSSAP00000023443	CD3epsilon isoform 1 precursor.	Tyrosine-protein kinase.	0.991
cd3e	lck	ENSSSAP00000106855	ENSSSAP00000006589	CD3epsilon isoform 1 precursor.	Tyrosine-protein kinase.	0.733
cd3e	lck-2	ENSSSAP00000106855	ENSSSAP00000072663	CD3epsilon isoform 1 precursor.	Tyrosine-protein kinase.	0.789
cd3e	rag2	ENSSSAP00000106855	ENSSSAP00000009083	CD3epsilon isoform 1 precursor.	V(D)J recombination-activating protein 2.	0.534
lck	LOC106584369	ENSSSAP00000006589	ENSSSAP00000066882	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.784
lck	LOC106613845	ENSSSAP00000006589	ENSSSAP00000023443	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.783
lck	cd3e	ENSSSAP00000006589	ENSSSAP00000106855	Tyrosine-protein kinase.	CD3epsilon isoform 1 precursor.	0.733
lck	rag2	ENSSSAP00000006589	ENSSSAP00000009083	Tyrosine-protein kinase.	V(D)J recombination-activating protein 2.	0.684
lck-2	LOC106584369	ENSSSAP00000072663	ENSSSAP00000066882	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.786