13 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106612799	Mucin-22-like. (904 aa)
	LOC106585490	Phospholipase A(2). (216 aa)
	ENSSSAP00000061152	Zgc:92162. (148 aa)
	LOC106581195	Uncharacterized protein LOC106581195 isoform X1. (905 aa)
	LOC106585295	Group 3 secretory phospholipase A2-like isoform X1. (734 aa)
	ENSSSAP00000117406	annotation not available (70 aa)
	LOC106579941	Phospholipase A(2). (142 aa)
	LOC106568300	Group 3 secretory phospholipase A2-like. (746 aa)
	LOC106601151	Phospholipase A(2). (153 aa)
	LOC106563359	Phospholipase A(2). (141 aa)
	ENSSSAP00000009185	annotation not available (164 aa)
	LOC106593742	Phospholipase A(2). (175 aa)
	ENSSSAP00000005633	annotation not available (86 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000005633	ENSSSAP00000009185	ENSSSAP00000005633	ENSSSAP00000009185	annotation not available	annotation not available	0.543
ENSSSAP00000005633	ENSSSAP00000061152	ENSSSAP00000005633	ENSSSAP00000061152	annotation not available	Zgc:92162.	0.543
ENSSSAP00000005633	LOC106568300	ENSSSAP00000005633	ENSSSAP00000118451	annotation not available	Group 3 secretory phospholipase A2-like.	0.582
ENSSSAP00000005633	LOC106581195	ENSSSAP00000005633	ENSSSAP00000095562	annotation not available	Uncharacterized protein LOC106581195 isoform X1.	0.574
ENSSSAP00000005633	LOC106585295	ENSSSAP00000005633	ENSSSAP00000104177	annotation not available	Group 3 secretory phospholipase A2-like isoform X1.	0.582
ENSSSAP00000005633	LOC106593742	ENSSSAP00000005633	ENSSSAP00000006811	annotation not available	Phospholipase A(2).	0.543
ENSSSAP00000005633	LOC106601151	ENSSSAP00000005633	ENSSSAP00000030151	annotation not available	Phospholipase A(2).	0.543
ENSSSAP00000005633	LOC106612799	ENSSSAP00000005633	ENSSSAP00000041057	annotation not available	Mucin-22-like.	0.574
ENSSSAP00000009185	ENSSSAP00000005633	ENSSSAP00000009185	ENSSSAP00000005633	annotation not available	annotation not available	0.543
ENSSSAP00000009185	ENSSSAP00000117406	ENSSSAP00000009185	ENSSSAP00000117406	annotation not available	annotation not available	0.543
ENSSSAP00000009185	LOC106563359	ENSSSAP00000009185	ENSSSAP00000027607	annotation not available	Phospholipase A(2).	0.573
ENSSSAP00000009185	LOC106568300	ENSSSAP00000009185	ENSSSAP00000118451	annotation not available	Group 3 secretory phospholipase A2-like.	0.632
ENSSSAP00000009185	LOC106581195	ENSSSAP00000009185	ENSSSAP00000095562	annotation not available	Uncharacterized protein LOC106581195 isoform X1.	0.632
ENSSSAP00000009185	LOC106585295	ENSSSAP00000009185	ENSSSAP00000104177	annotation not available	Group 3 secretory phospholipase A2-like isoform X1.	0.632
ENSSSAP00000009185	LOC106585490	ENSSSAP00000009185	ENSSSAP00000055315	annotation not available	Phospholipase A(2).	0.587
ENSSSAP00000009185	LOC106612799	ENSSSAP00000009185	ENSSSAP00000041057	annotation not available	Mucin-22-like.	0.632
ENSSSAP00000061152	ENSSSAP00000005633	ENSSSAP00000061152	ENSSSAP00000005633	Zgc:92162.	annotation not available	0.543
ENSSSAP00000061152	ENSSSAP00000117406	ENSSSAP00000061152	ENSSSAP00000117406	Zgc:92162.	annotation not available	0.543
ENSSSAP00000061152	LOC106563359	ENSSSAP00000061152	ENSSSAP00000027607	Zgc:92162.	Phospholipase A(2).	0.576
ENSSSAP00000061152	LOC106568300	ENSSSAP00000061152	ENSSSAP00000118451	Zgc:92162.	Group 3 secretory phospholipase A2-like.	0.632