STRINGSTRING
LOC106582022 LOC106582022 LOC106601158 LOC106601158 hmgb1 hmgb1 LOC106613768 LOC106613768 LOC106608403 LOC106608403 hmgxb3 hmgxb3 sox10 sox10 LOC106607053 LOC106607053 LOC106603814 LOC106603814 LOC106569449 LOC106569449 hmgb1-2 hmgb1-2 SOX10 SOX10 LOC106610697 LOC106610697 LOC106590076 LOC106590076 LOC106590153 LOC106590153 LOC106584620 LOC106584620 SMARCE1 SMARCE1 LOC106591826 LOC106591826 HMG20B HMG20B LOC106574593 LOC106574593 LOC106567634 LOC106567634 SOX4 SOX4 LOC106606426 LOC106606426 LOC100136470 LOC100136470 LOC106571023 LOC106571023 ubtf ubtf LOC106612439 LOC106612439 LOC106584342 LOC106584342 LOC106571238 LOC106571238 ENSSSAP00000033108 ENSSSAP00000033108 LOC106602948 LOC106602948 LOC106560691 LOC106560691 LOC106567996 LOC106567996 LOC106578720 LOC106578720 LOC106578689 LOC106578689 ENSSSAP00000039462 ENSSSAP00000039462 bhmg1 bhmg1 LOC106577904 LOC106577904 LOC106565395 LOC106565395 LOC106562393 LOC106562393 ENSSSAP00000040720 ENSSSAP00000040720 SMARCE1-2 SMARCE1-2 LOC106576150 LOC106576150 LOC106563671 LOC106563671 hbp1 hbp1 LOC106572917 LOC106572917 ENSSSAP00000047197 ENSSSAP00000047197 SMARCE1-3 SMARCE1-3 ENSSSAP00000048891 ENSSSAP00000048891 lef1 lef1 pms1 pms1 LOC106607186 LOC106607186 Sox6 Sox6 HBP1 HBP1 ubf1 ubf1 LOC106608338 LOC106608338 sox14 sox14 LOC106586732 LOC106586732 LOC106602389 LOC106602389 LOC106602895 LOC106602895 SSRP1 SSRP1 LOC106599578 LOC106599578 LOC106571023-2 LOC106571023-2 LOC106566354 LOC106566354 HBP1-2 HBP1-2 LOC106565622 LOC106565622 LOC106561060 LOC106561060 TFAM TFAM sox12 sox12 LOC106600314 LOC106600314 LOC106579008 LOC106579008 LOC106567524 LOC106567524 LOC106608930 LOC106608930 hmg20a hmg20a sox8 sox8 LOC106601158-2 LOC106601158-2 LOC106572669 LOC106572669 LOC106608953 LOC106608953 sox6 sox6 LOC106582442 LOC106582442 LOC106586270 LOC106586270 LOC100380856 LOC100380856 LOC106607141 LOC106607141 kmt2d kmt2d hmgb2 hmgb2 LOC106598900 LOC106598900 tox3 tox3 LOC106580642 LOC106580642 HMGXB4 HMGXB4 hmgb3 hmgb3 LOC106568666 LOC106568666 LOC106588265 LOC106588265 LOC106579026 LOC106579026 LOC106608972 LOC106608972 sox11 sox11 LOC106609328 LOC106609328 LOC106583529 LOC106583529 LOC106567484 LOC106567484 HBP1-3 HBP1-3 LOC106569297 LOC106569297 LOC100286423 LOC100286423 LOC106580381 LOC106580381 wdhd1 wdhd1 LOC106568871 LOC106568871 LOC106570138 LOC106570138 LOC106583657 LOC106583657 LOC106602577 LOC106602577 LOC106563056 LOC106563056 TCF7L1 TCF7L1 LOC106583120 LOC106583120 LOC106565336 LOC106565336 LOC106589326 LOC106589326 LOC106589333 LOC106589333 LOC106589342 LOC106589342 LOC106565587 LOC106565587 LOC106565275 LOC106565275
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106582022Transcription factor Sox-1a isoform X1. (309 aa)
LOC106601158Transcription factor Sox-10-like. (496 aa)
hmgb1High mobility group protein B1 isoform X1. (203 aa)
LOC106613768annotation not available (304 aa)
LOC106608403High mobility group protein B2-like. (212 aa)
hmgxb3HMG domain-containing protein 3 isoform X3. (1318 aa)
sox10Transcription factor SOX-10. (495 aa)
LOC106607053HMG box-containing protein 4-like. (620 aa)
LOC106603814Transcription factor 7-like 2 isoform X3. (472 aa)
LOC106569449TOX high mobility group box family member 4-A-like isoform X2. (713 aa)
hmgb1-2High mobility group-T protein. (345 aa)
SOX10Transcription factor Sox-10-like. (492 aa)
LOC106610697Transcription factor SOX. (335 aa)
LOC106590076Transcription factor Sox-17-alpha-A-like. (321 aa)
LOC106590153Transcription factor Sox-17-alpha-A-like. (390 aa)
LOC106584620Transcription factor SOX5/6/13 (SOX group D). (835 aa)
SMARCE1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like. (431 aa)
LOC106591826FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (409 aa)
HMG20Bannotation not available (296 aa)
LOC106574593Transcription factor Sox-1a-like. (339 aa)
LOC106567634HMG box transcription factor BBX-like isoform X1. (928 aa)
SOX4Transcription factor SOX. (365 aa)
LOC106606426Transcription factor Sox-9-A-like isoform X1. (490 aa)
LOC100136470Sox8. (458 aa)
LOC106571023Transcription factor Sox-7-like. (437 aa)
ubtfNucleolar transcription factor 1 isoform X2. (762 aa)
LOC106612439High mobility group-T protein-like isoform X2. (196 aa)
LOC106584342Transcription factor Sox-2-like. (315 aa)
LOC106571238Transcription factor SOX. (369 aa)
ENSSSAP00000033108annotation not available (227 aa)
LOC106602948High mobility group protein B3-like isoform X1. (225 aa)
LOC106560691Transcription factor Sox-19a-like. (311 aa)
LOC106567996Transcription factor 7-like 1-B isoform X1. (625 aa)
LOC106578720Transcription factor Sox-17-beta.2-like. (317 aa)
LOC106578689Transcription factor Sox-17-alpha-A-like. (393 aa)
ENSSSAP00000039462Transcription factor A, mitochondrial-like. (269 aa)
bhmg1Basic helix-loop-helix and HMG box domain-containing protein 1 isoform X1. (520 aa)
LOC106577904Transcription factor Sox-19b-like. (303 aa)
LOC106565395Transcription factor SOX. (397 aa)
LOC106562393TOX high mobility group box family member 3-like. (485 aa)
ENSSSAP00000040720annotation not available (269 aa)
SMARCE1-2SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like. (591 aa)
LOC106576150Transcription factor SOX-5-like isoform X3. (780 aa)
LOC106563671High mobility group protein B3-like. (201 aa)
hbp1LOW QUALITY PROTEIN: HMG box-containing protein 1. (458 aa)
LOC106572917Transcription factor Sox-18A-like. (596 aa)
ENSSSAP00000047197SRY-box transcription factor 11a. (338 aa)
SMARCE1-3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like. (429 aa)
ENSSSAP00000048891annotation not available (701 aa)
lef1Lymphoid enhancer-binding factor 1 isoform X5. (408 aa)
pms1PMS1 protein homolog 1 isoform X2. (914 aa)
LOC106607186SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like. (432 aa)
Sox6Transcription factor SOX5/6/13 (SOX group D). (244 aa)
HBP1HMG box-containing protein 1-like isoform X1. (479 aa)
ubf1Nucleolar transcription factor 1 isoform X4. (693 aa)
LOC106608338Transcription factor Sox-7-like. (455 aa)
sox14Transcription factor SOX-14. (235 aa)
LOC106586732Transcription factor Sox-1a-like isoform X1. (309 aa)
LOC106602389High mobility group protein B2-like isoform X1. (238 aa)
LOC106602895Transcription factor Sox-19a-like. (322 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (705 aa)
LOC106599578Thymocyte selection-associated high mobility group box protein TOX-like isoform X1. (616 aa)
LOC106571023-2Transcription factor Sox-7-like. (437 aa)
LOC106566354Transcription factor Sox-18-like. (513 aa)
HBP1-2HMG box-containing protein 1-like isoform X1. (493 aa)
LOC106565622Transcription factor SOX-13-like isoform X3. (663 aa)
LOC106561060Transcription factor SOX-6-like isoform X1. (784 aa)
TFAMTranscription factor A, mitochondrial-like. (267 aa)
sox12Transcription factor SOX. (396 aa)
LOC106600314TOX high mobility group box family member 4-A-like isoform X1. (704 aa)
LOC106579008Transcription factor Sox-9-B-like isoform X2. (492 aa)
LOC106567524Lymphoid enhancer-binding factor 1-like isoform X1. (511 aa)
LOC106608930High mobility group protein B3-like. (208 aa)
hmg20aHigh mobility group protein 20A isoform X1. (323 aa)
sox8Transcription factor SOX-8 isoform X2. (470 aa)
LOC106601158-2Transcription factor Sox-10-like. (496 aa)
LOC106572669Histone-lysine N-methyltransferase 2D-like isoform X3. (5331 aa)
LOC106608953Transcription factor Sox-19b-like. (291 aa)
sox6Transcription factor SOX-6. (817 aa)
LOC106582442Transcription factor Sox-21-B-like. (241 aa)
LOC106586270Transcription factor Sox-21-B. (243 aa)
LOC100380856TOX high mobility group box family member 2 isoform X2. (410 aa)
LOC106607141Transcription factor Sox-10-like. (496 aa)
kmt2dHistone-lysine N-methyltransferase 2D isoform X1. (5195 aa)
hmgb2High mobility group protein B2. (273 aa)
LOC106598900Transcription factor Sox-14-like. (236 aa)
tox3TOX high mobility group box family member 3. (609 aa)
LOC106580642High mobility group-T protein-like isoform X1. (205 aa)
HMGXB4HMG-box containing 4. (206 aa)
hmgb3High mobility group protein B3. (206 aa)
LOC106568666Nucleolar transcription factor 1-A-like isoform X2. (719 aa)
LOC106588265Protein capicua homolog. (2567 aa)
LOC106579026Transcription factor 7-like 2 isoform X2. (640 aa)
LOC106608972TOX high mobility group box family member 4-B-like isoform X1. (683 aa)
sox11Transcription factor SOX. (367 aa)
LOC106609328Transcription factor SOX-5-like isoform X3. (793 aa)
LOC106583529Protein polybromo-1-like isoform X1. (1706 aa)
LOC106567484Transcription factor SOX-30-like. (635 aa)
HBP1-3HMG box-containing protein 1-like. (471 aa)
LOC106569297Transcription factor SOX. (385 aa)
LOC100286423FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
LOC106580381Transcription factor 7-like 1-B isoform X1. (579 aa)
wdhd1WD repeat and HMG-box DNA-binding protein 1 isoform X1. (1169 aa)
LOC106568871Thymocyte selection-associated high mobility group box protein TOX-like isoform X1. (566 aa)
LOC106570138Protein capicua homolog. (2564 aa)
LOC106583657TOX high mobility group box family member 2-like isoform X1. (551 aa)
LOC106602577FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (670 aa)
LOC106563056Transcription factor 7-like 1-B isoform X1. (622 aa)
TCF7L1Transcription factor 7-like 1-A. (616 aa)
LOC106583120LOW QUALITY PROTEIN: transcription factor Sox-13-like. (633 aa)
LOC106565336Protein polybromo-1-like isoform X1. (1682 aa)
LOC106589326Transcription factor 7-like 2 isoform X3. (644 aa)
LOC106589333Transcription factor Sox-8-like. (465 aa)
LOC106589342Transcription factor Sox-9-A-like. (491 aa)
LOC106565587LOW QUALITY PROTEIN: protein polybromo-1-like. (1663 aa)
LOC106565275TOX high mobility group box family member 2-like isoform X2. (552 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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