(11 nodes) Rho GTPase-activating protein, FF domain, and Skeletal muscle satellite cell migration network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105929367	Rho GTPase activating protein 35b. (1529 aa)
	LOC105927124	Uncharacterized protein. (193 aa)
	arhgap5	Rho GTPase activating protein 5. (1505 aa)
	LOC105937131	Sema domain-containing protein. (1848 aa)
	arhgef11	Rho guanine nucleotide exchange factor (GEF) 11. (1372 aa)
	arhgap35	Rho GTPase-activating protein 5. (1558 aa)
	LOC105928052	Ras homolog family member Ca. (196 aa)
	LOC105929125	Transforming protein RhoA. (193 aa)
	ENSFHEP00000019207	Uncharacterized protein. (118 aa)
	rnd3	Rho family GTPase 3a. (243 aa)
	LOC105927499	Uncharacterized protein. (1229 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000019207	LOC105927124	ENSFHEP00000019207	ENSFHEP00000003499	Uncharacterized protein.	Uncharacterized protein.	0.470
ENSFHEP00000019207	LOC105927499	ENSFHEP00000019207	ENSFHEP00000034819	Uncharacterized protein.	Uncharacterized protein.	0.830
ENSFHEP00000019207	LOC105928052	ENSFHEP00000019207	ENSFHEP00000016210	Uncharacterized protein.	Ras homolog family member Ca.	0.471
ENSFHEP00000019207	LOC105929125	ENSFHEP00000019207	ENSFHEP00000016214	Uncharacterized protein.	Transforming protein RhoA.	0.471
ENSFHEP00000019207	LOC105929367	ENSFHEP00000019207	ENSFHEP00000000827	Uncharacterized protein.	Rho GTPase activating protein 35b.	0.861
ENSFHEP00000019207	LOC105937131	ENSFHEP00000019207	ENSFHEP00000009399	Uncharacterized protein.	Sema domain-containing protein.	0.461
ENSFHEP00000019207	arhgap35	ENSFHEP00000019207	ENSFHEP00000014838	Uncharacterized protein.	Rho GTPase-activating protein 5.	0.861
ENSFHEP00000019207	arhgap5	ENSFHEP00000019207	ENSFHEP00000008976	Uncharacterized protein.	Rho GTPase activating protein 5.	0.861
ENSFHEP00000019207	arhgef11	ENSFHEP00000019207	ENSFHEP00000009429	Uncharacterized protein.	Rho guanine nucleotide exchange factor (GEF) 11.	0.854
ENSFHEP00000019207	rnd3	ENSFHEP00000019207	ENSFHEP00000032262	Uncharacterized protein.	Rho family GTPase 3a.	0.447
LOC105927124	ENSFHEP00000019207	ENSFHEP00000003499	ENSFHEP00000019207	Uncharacterized protein.	Uncharacterized protein.	0.470
LOC105927124	LOC105927499	ENSFHEP00000003499	ENSFHEP00000034819	Uncharacterized protein.	Uncharacterized protein.	0.947
LOC105927124	LOC105929367	ENSFHEP00000003499	ENSFHEP00000000827	Uncharacterized protein.	Rho GTPase activating protein 35b.	0.973
LOC105927124	LOC105937131	ENSFHEP00000003499	ENSFHEP00000009399	Uncharacterized protein.	Sema domain-containing protein.	0.461
LOC105927124	arhgap35	ENSFHEP00000003499	ENSFHEP00000014838	Uncharacterized protein.	Rho GTPase-activating protein 5.	0.973
LOC105927124	arhgap5	ENSFHEP00000003499	ENSFHEP00000008976	Uncharacterized protein.	Rho GTPase activating protein 5.	0.976
LOC105927124	arhgef11	ENSFHEP00000003499	ENSFHEP00000009429	Uncharacterized protein.	Rho guanine nucleotide exchange factor (GEF) 11.	0.952
LOC105927124	rnd3	ENSFHEP00000003499	ENSFHEP00000032262	Uncharacterized protein.	Rho family GTPase 3a.	0.446
LOC105927499	ENSFHEP00000019207	ENSFHEP00000034819	ENSFHEP00000019207	Uncharacterized protein.	Uncharacterized protein.	0.830
LOC105927499	LOC105927124	ENSFHEP00000034819	ENSFHEP00000003499	Uncharacterized protein.	Uncharacterized protein.	0.947