STRINGSTRING
supt20h supt20h tada3 tada3 kat2a kat2a tada2a tada2a kat2b kat2b supt3h supt3h TADA1 TADA1 trrap trrap LOC105927398 LOC105927398 sgf29 sgf29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
supt20hSPT20 homolog, SAGA complex component. (834 aa)
tada3Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. (431 aa)
kat2aK(lysine) acetyltransferase 2A. (729 aa)
tada2aTranscriptional adapter. (445 aa)
kat2bHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (792 aa)
supt3hUncharacterized protein. (419 aa)
TADA1Transcriptional adaptor 1. (333 aa)
trrapTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3512 aa)
LOC105927398Ubiquitin carboxyl-terminal hydrolase. (506 aa)
sgf29SAGA complex associated factor 29. (300 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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