42 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl35a	Ribosomal protein L35a. (110 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (235 aa)
	RPL7A	Ribosomal protein L7a. (266 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	ENSFHEP00000004789	Ribosomal_S17_N domain-containing protein. (75 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (113 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
	rpl28	Ribosomal protein L28. (169 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rpl38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	rpl8	Ribosomal protein L8. (257 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	rack1	Receptor for activated C kinase 1. (317 aa)
	LOC105921137	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (149 aa)
	rpl37a	Ribosomal protein L37a. (92 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
	rpl32	Ribosomal protein L32. (93 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	rplp0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	rpl4	Ribosomal protein L4. (368 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (227 aa)
	rpl7l1	Ribosomal protein L7-like 1. (251 aa)
	LOC105935138	40S ribosomal protein S27. (95 aa)
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
	rpl24	Ribosomal protein L24. (157 aa)
	rps21	Ribosomal protein S21. (137 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	rps10	Ribosomal protein S10. (166 aa)
	rpl14	Ribosomal protein L14. (137 aa)
	rpl39	Ribosomal protein L39. (51 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (211 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (170 aa)
	RPL30	Ribosomal protein L30. (95 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000004789	LOC105921137	ENSFHEP00000004789	ENSFHEP00000012473	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
ENSFHEP00000004789	LOC105935138	ENSFHEP00000004789	ENSFHEP00000028123	Ribosomal_S17_N domain-containing protein.	40S ribosomal protein S27.	0.999
ENSFHEP00000004789	RPL30	ENSFHEP00000004789	ENSFHEP00000032905	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L30.	0.999
ENSFHEP00000004789	RPL7A	ENSFHEP00000004789	ENSFHEP00000001503	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L7a.	0.999
ENSFHEP00000004789	fau	ENSFHEP00000004789	ENSFHEP00000017101	Ribosomal_S17_N domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSFHEP00000004789	rack1	ENSFHEP00000004789	ENSFHEP00000011700	Ribosomal_S17_N domain-containing protein.	Receptor for activated C kinase 1.	0.999
ENSFHEP00000004789	rpl10	ENSFHEP00000004789	ENSFHEP00000010108	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L10.	0.999
ENSFHEP00000004789	rpl12	ENSFHEP00000004789	ENSFHEP00000027665	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSFHEP00000004789	rpl13	ENSFHEP00000004789	ENSFHEP00000024510	Ribosomal_S17_N domain-containing protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
ENSFHEP00000004789	rpl13a	ENSFHEP00000004789	ENSFHEP00000003308	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
ENSFHEP00000004789	rpl14	ENSFHEP00000004789	ENSFHEP00000031299	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L14.	0.999
ENSFHEP00000004789	rpl15	ENSFHEP00000004789	ENSFHEP00000032471	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
ENSFHEP00000004789	rpl17	ENSFHEP00000004789	ENSFHEP00000001400	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.999
ENSFHEP00000004789	rpl18a	ENSFHEP00000004789	ENSFHEP00000026689	Ribosomal_S17_N domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
ENSFHEP00000004789	rpl21	ENSFHEP00000004789	ENSFHEP00000031004	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L21.	0.999
ENSFHEP00000004789	rpl24	ENSFHEP00000004789	ENSFHEP00000029457	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L24.	0.999
ENSFHEP00000004789	rpl27	ENSFHEP00000004789	ENSFHEP00000005448	Ribosomal_S17_N domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
ENSFHEP00000004789	rpl28	ENSFHEP00000004789	ENSFHEP00000006663	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L28.	0.999
ENSFHEP00000004789	rpl32	ENSFHEP00000004789	ENSFHEP00000021557	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L32.	0.999
ENSFHEP00000004789	rpl35a	ENSFHEP00000004789	ENSFHEP00000000273	Ribosomal_S17_N domain-containing protein.	Ribosomal protein L35a.	0.999