STRINGSTRING
LOC105939716 LOC105939716 sytl1 sytl1 rab27b rab27b rab27a rab27a madd madd LOC105937254 LOC105937254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105939716Synaptotagmin-like 2b. (1360 aa)
sytl1Synaptotagmin 1-like protein. (532 aa)
rab27bRAB27B, member RAS oncogene family. (218 aa)
rab27aRAB27A, member RAS oncogene family. (220 aa)
maddMAP-kinase activating death domain. (1653 aa)
LOC105937254Uncharacterized protein. (218 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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