21 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105929494	Heme binding protein 2. (192 aa)
	LOC105923340	Uncharacterized protein; Belongs to the peptidase C2 family. (649 aa)
	LOC105923339	Uncharacterized protein; Belongs to the peptidase C2 family. (659 aa)
	CAPNS1	Calpain small subunit 1. (216 aa)
	LOC105921154	Calpain-3; Belongs to the peptidase C2 family. (778 aa)
	LOC105921155	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (698 aa)
	capn7	Calpain 7; Belongs to the peptidase C2 family. (813 aa)
	LOC105937301	Heme-binding protein soul5. (220 aa)
	LOC105930119	Calpain, small subunit 1 b. (216 aa)
	LOC105923306	Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family. (667 aa)
	KLHL12	Kelch like family member 12. (633 aa)
	LOC105920176	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family. (697 aa)
	ENSFHEP00000024526	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (189 aa)
	ENSFHEP00000024553	Uncharacterized protein. (169 aa)
	pdcd6	Programmed cell death 6. (185 aa)
	LOC105919907	Calpain-5; Belongs to the peptidase C2 family. (642 aa)
	sri	Uncharacterized protein. (210 aa)
	LOC105930200	Calpain 5a; Belongs to the peptidase C2 family. (637 aa)
	pef1	Penta-EF-hand domain containing 1. (299 aa)
	LOC105933712	Zgc:55262; Belongs to the peptidase C2 family. (660 aa)
	cast	Calpastatin. (892 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPNS1	ENSFHEP00000024526	ENSFHEP00000010777	ENSFHEP00000024526	Calpain small subunit 1.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.951
CAPNS1	ENSFHEP00000024553	ENSFHEP00000010777	ENSFHEP00000024553	Calpain small subunit 1.	Uncharacterized protein.	0.687
CAPNS1	LOC105919907	ENSFHEP00000010777	ENSFHEP00000029604	Calpain small subunit 1.	Calpain-5; Belongs to the peptidase C2 family.	0.840
CAPNS1	LOC105920176	ENSFHEP00000010777	ENSFHEP00000024480	Calpain small subunit 1.	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.	0.677
CAPNS1	LOC105921154	ENSFHEP00000010777	ENSFHEP00000012037	Calpain small subunit 1.	Calpain-3; Belongs to the peptidase C2 family.	0.677
CAPNS1	LOC105921155	ENSFHEP00000010777	ENSFHEP00000012069	Calpain small subunit 1.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.677
CAPNS1	LOC105923306	ENSFHEP00000010777	ENSFHEP00000023842	Calpain small subunit 1.	Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family.	0.677
CAPNS1	LOC105923339	ENSFHEP00000010777	ENSFHEP00000003224	Calpain small subunit 1.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.678
CAPNS1	LOC105923340	ENSFHEP00000010777	ENSFHEP00000003152	Calpain small subunit 1.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.677
CAPNS1	LOC105930200	ENSFHEP00000010777	ENSFHEP00000033356	Calpain small subunit 1.	Calpain 5a; Belongs to the peptidase C2 family.	0.842
CAPNS1	LOC105933712	ENSFHEP00000010777	ENSFHEP00000033647	Calpain small subunit 1.	Zgc:55262; Belongs to the peptidase C2 family.	0.677
CAPNS1	capn7	ENSFHEP00000010777	ENSFHEP00000014778	Calpain small subunit 1.	Calpain 7; Belongs to the peptidase C2 family.	0.823
CAPNS1	cast	ENSFHEP00000010777	ENSFHEP00000034900	Calpain small subunit 1.	Calpastatin.	0.939
ENSFHEP00000024526	CAPNS1	ENSFHEP00000024526	ENSFHEP00000010777	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain small subunit 1.	0.951
ENSFHEP00000024526	ENSFHEP00000024553	ENSFHEP00000024526	ENSFHEP00000024553	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Uncharacterized protein.	0.474
ENSFHEP00000024526	LOC105920176	ENSFHEP00000024526	ENSFHEP00000024480	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.	0.450
ENSFHEP00000024526	LOC105921154	ENSFHEP00000024526	ENSFHEP00000012037	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain-3; Belongs to the peptidase C2 family.	0.464
ENSFHEP00000024526	LOC105921155	ENSFHEP00000024526	ENSFHEP00000012069	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.466
ENSFHEP00000024526	LOC105923339	ENSFHEP00000024526	ENSFHEP00000003224	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.589
ENSFHEP00000024526	LOC105923340	ENSFHEP00000024526	ENSFHEP00000003152	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.452