(24 nodes) Zinc finger, nuclear hormone receptor-type, and Nuclear receptor coactivator network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105938548	Peroxisome proliferator-activated receptor alpha b. (469 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (508 aa)
	ENSFHEP00000005412	Nuclear receptor coactivator 1. (971 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (489 aa)
	ppara	Peroxisome proliferator-activated receptor alpha a. (490 aa)
	LOC105939110	Nuclear receptor subfamily 1, group D, member 4b. (644 aa)
	LOC105936755	Nuclear receptor subfamily 1, group D, member 2a. (577 aa)
	LOC105936476	Uncharacterized protein. (351 aa)
	LOC105925883	Vitamin D receptor a. (420 aa)
	RXRB	Retinoid X receptor beta. (361 aa)
	LOC105937897	Uncharacterized protein. (448 aa)
	LOC105926355	Retinoic acid receptor RXR-beta. (444 aa)
	LOC105940391	Thyroid hormone receptor alpha. (413 aa)
	nr1d2	Nuclear receptor subfamily 1, group D, member 2b. (598 aa)
	LOC105922411	Nuclear receptor coactivator 3. (1519 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (464 aa)
	LOC105927864	Retinoic acid receptor RXR-beta. (471 aa)
	PPARG	Peroxisome proliferator activated receptor gamma. (533 aa)
	NCOA2	Nuclear receptor coactivator. (1494 aa)
	LOC105931721	Vitamin D receptor b. (425 aa)
	LOC105925854	Nuclear receptor subfamily 1, group H, member 5. (494 aa)
	rxra	Retinoid X receptor, alpha a. (501 aa)
	ncoa2	Nuclear receptor coactivator. (1446 aa)
	thrb	Thyroid hormone receptor beta. (395 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000005412	LOC105925854	ENSFHEP00000005412	ENSFHEP00000028266	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group H, member 5.	0.830
ENSFHEP00000005412	LOC105925883	ENSFHEP00000005412	ENSFHEP00000008403	Nuclear receptor coactivator 1.	Vitamin D receptor a.	0.792
ENSFHEP00000005412	LOC105926355	ENSFHEP00000005412	ENSFHEP00000012750	Nuclear receptor coactivator 1.	Retinoic acid receptor RXR-beta.	0.794
ENSFHEP00000005412	LOC105927864	ENSFHEP00000005412	ENSFHEP00000020790	Nuclear receptor coactivator 1.	Retinoic acid receptor RXR-beta.	0.794
ENSFHEP00000005412	LOC105931721	ENSFHEP00000005412	ENSFHEP00000024951	Nuclear receptor coactivator 1.	Vitamin D receptor b.	0.792
ENSFHEP00000005412	LOC105936476	ENSFHEP00000005412	ENSFHEP00000007939	Nuclear receptor coactivator 1.	Uncharacterized protein.	0.899
ENSFHEP00000005412	LOC105936755	ENSFHEP00000005412	ENSFHEP00000007611	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group D, member 2a.	0.736
ENSFHEP00000005412	LOC105937897	ENSFHEP00000005412	ENSFHEP00000011029	Nuclear receptor coactivator 1.	Uncharacterized protein.	0.673
ENSFHEP00000005412	LOC105938548	ENSFHEP00000005412	ENSFHEP00000001764	Nuclear receptor coactivator 1.	Peroxisome proliferator-activated receptor alpha b.	0.716
ENSFHEP00000005412	LOC105939110	ENSFHEP00000005412	ENSFHEP00000007563	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group D, member 4b.	0.736
ENSFHEP00000005412	LOC105940391	ENSFHEP00000005412	ENSFHEP00000014788	Nuclear receptor coactivator 1.	Thyroid hormone receptor alpha.	0.673
ENSFHEP00000005412	NCOA2	ENSFHEP00000005412	ENSFHEP00000023388	Nuclear receptor coactivator 1.	Nuclear receptor coactivator.	0.539
ENSFHEP00000005412	PPARG	ENSFHEP00000005412	ENSFHEP00000021025	Nuclear receptor coactivator 1.	Peroxisome proliferator activated receptor gamma.	0.716
ENSFHEP00000005412	RXRB	ENSFHEP00000005412	ENSFHEP00000010597	Nuclear receptor coactivator 1.	Retinoid X receptor beta.	0.794
ENSFHEP00000005412	ncoa2	ENSFHEP00000005412	ENSFHEP00000031711	Nuclear receptor coactivator 1.	Nuclear receptor coactivator.	0.539
ENSFHEP00000005412	nr1d2	ENSFHEP00000005412	ENSFHEP00000017246	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group D, member 2b.	0.736
ENSFHEP00000005412	nr1h3	ENSFHEP00000005412	ENSFHEP00000020039	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group H, member 3.	0.906
ENSFHEP00000005412	nr1h4	ENSFHEP00000005412	ENSFHEP00000007391	Nuclear receptor coactivator 1.	Nuclear receptor subfamily 1, group H, member 4.	0.830
ENSFHEP00000005412	ppara	ENSFHEP00000005412	ENSFHEP00000007555	Nuclear receptor coactivator 1.	Peroxisome proliferator-activated receptor alpha a.	0.661
ENSFHEP00000005412	ppard	ENSFHEP00000005412	ENSFHEP00000003618	Nuclear receptor coactivator 1.	Peroxisome proliferator-activated receptor delta b.	0.503