(17 nodes) Mixed, incl. Selenoprotein, Rdx-type, and Protein adenylyltransferase SelO network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mien1	Uncharacterized protein. (138 aa)
	selenoo	Selenoprotein O1. (690 aa)
	selenoh	Uncharacterized protein. (123 aa)
	sh3bgrl	SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family. (115 aa)
	selenom	Selenoprotein M. (125 aa)
	ENSFHEP00000015724	Uncharacterized protein. (393 aa)
	selenof	Selenoprotein F. (152 aa)
	selenop	SelP_N domain-containing protein. (296 aa)
	selenos	Selenoprotein S. (189 aa)
	LOC105924591	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (172 aa)
	selenok	Selenoprotein K. (94 aa)
	LOC105935766	Uncharacterized protein. (364 aa)
	selenon	Selenoprotein N. (550 aa)
	LOC105933927	SH3 domain binding glutamate-rich protein like 3. (92 aa)
	LOC105922386	Selenoprotein T2-like. (172 aa)
	selenot	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (190 aa)
	MSRB1	Methionine sulfoxide reductase B1a. (92 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000015724	LOC105933927	ENSFHEP00000015724	ENSFHEP00000023818	Uncharacterized protein.	SH3 domain binding glutamate-rich protein like 3.	0.424
ENSFHEP00000015724	selenof	ENSFHEP00000015724	ENSFHEP00000015805	Uncharacterized protein.	Selenoprotein F.	0.424
ENSFHEP00000015724	selenok	ENSFHEP00000015724	ENSFHEP00000020645	Uncharacterized protein.	Selenoprotein K.	0.435
ENSFHEP00000015724	selenom	ENSFHEP00000015724	ENSFHEP00000015507	Uncharacterized protein.	Selenoprotein M.	0.426
ENSFHEP00000015724	selenon	ENSFHEP00000015724	ENSFHEP00000023297	Uncharacterized protein.	Selenoprotein N.	0.422
ENSFHEP00000015724	selenos	ENSFHEP00000015724	ENSFHEP00000017559	Uncharacterized protein.	Selenoprotein S.	0.435
ENSFHEP00000015724	selenot	ENSFHEP00000015724	ENSFHEP00000034243	Uncharacterized protein.	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	0.431
ENSFHEP00000015724	sh3bgrl	ENSFHEP00000015724	ENSFHEP00000013546	Uncharacterized protein.	SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.	0.546
LOC105922386	selenof	ENSFHEP00000030167	ENSFHEP00000015805	Selenoprotein T2-like.	Selenoprotein F.	0.498
LOC105922386	selenoh	ENSFHEP00000030167	ENSFHEP00000013242	Selenoprotein T2-like.	Uncharacterized protein.	0.414
LOC105922386	selenok	ENSFHEP00000030167	ENSFHEP00000020645	Selenoprotein T2-like.	Selenoprotein K.	0.435
LOC105922386	selenom	ENSFHEP00000030167	ENSFHEP00000015507	Selenoprotein T2-like.	Selenoprotein M.	0.430
LOC105922386	selenon	ENSFHEP00000030167	ENSFHEP00000023297	Selenoprotein T2-like.	Selenoprotein N.	0.420
LOC105924591	selenof	ENSFHEP00000020401	ENSFHEP00000015805	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	Selenoprotein F.	0.498
LOC105924591	selenoh	ENSFHEP00000020401	ENSFHEP00000013242	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	Uncharacterized protein.	0.414
LOC105924591	selenok	ENSFHEP00000020401	ENSFHEP00000020645	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	Selenoprotein K.	0.435
LOC105924591	selenom	ENSFHEP00000020401	ENSFHEP00000015507	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	Selenoprotein M.	0.430
LOC105924591	selenon	ENSFHEP00000020401	ENSFHEP00000023297	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	Selenoprotein N.	0.420
LOC105933927	ENSFHEP00000015724	ENSFHEP00000023818	ENSFHEP00000015724	SH3 domain binding glutamate-rich protein like 3.	Uncharacterized protein.	0.424
LOC105933927	LOC105935766	ENSFHEP00000023818	ENSFHEP00000022304	SH3 domain binding glutamate-rich protein like 3.	Uncharacterized protein.	0.424