5 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dennd1b	DENN domain containing 1B. (878 aa)
	ENSFHEP00000007645	UDENN domain-containing protein. (222 aa)
	rab35	RAB35, member RAS oncogene family b. (201 aa)
	LOC105917109	UDENN domain-containing protein. (753 aa)
	LOC105938887	Si:dkey-16l2.16. (162 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000007645	LOC105917109	ENSFHEP00000007645	ENSFHEP00000026160	UDENN domain-containing protein.	UDENN domain-containing protein.	0.899
ENSFHEP00000007645	LOC105938887	ENSFHEP00000007645	ENSFHEP00000030561	UDENN domain-containing protein.	Si:dkey-16l2.16.	0.894
ENSFHEP00000007645	dennd1b	ENSFHEP00000007645	ENSFHEP00000002379	UDENN domain-containing protein.	DENN domain containing 1B.	0.624
ENSFHEP00000007645	rab35	ENSFHEP00000007645	ENSFHEP00000023714	UDENN domain-containing protein.	RAB35, member RAS oncogene family b.	0.894
LOC105917109	ENSFHEP00000007645	ENSFHEP00000026160	ENSFHEP00000007645	UDENN domain-containing protein.	UDENN domain-containing protein.	0.899
LOC105917109	LOC105938887	ENSFHEP00000026160	ENSFHEP00000030561	UDENN domain-containing protein.	Si:dkey-16l2.16.	0.894
LOC105917109	dennd1b	ENSFHEP00000026160	ENSFHEP00000002379	UDENN domain-containing protein.	DENN domain containing 1B.	0.616
LOC105917109	rab35	ENSFHEP00000026160	ENSFHEP00000023714	UDENN domain-containing protein.	RAB35, member RAS oncogene family b.	0.894
LOC105938887	ENSFHEP00000007645	ENSFHEP00000030561	ENSFHEP00000007645	Si:dkey-16l2.16.	UDENN domain-containing protein.	0.894
LOC105938887	LOC105917109	ENSFHEP00000030561	ENSFHEP00000026160	Si:dkey-16l2.16.	UDENN domain-containing protein.	0.894
LOC105938887	dennd1b	ENSFHEP00000030561	ENSFHEP00000002379	Si:dkey-16l2.16.	DENN domain containing 1B.	0.870
LOC105938887	rab35	ENSFHEP00000030561	ENSFHEP00000023714	Si:dkey-16l2.16.	RAB35, member RAS oncogene family b.	0.934
dennd1b	ENSFHEP00000007645	ENSFHEP00000002379	ENSFHEP00000007645	DENN domain containing 1B.	UDENN domain-containing protein.	0.624
dennd1b	LOC105917109	ENSFHEP00000002379	ENSFHEP00000026160	DENN domain containing 1B.	UDENN domain-containing protein.	0.616
dennd1b	LOC105938887	ENSFHEP00000002379	ENSFHEP00000030561	DENN domain containing 1B.	Si:dkey-16l2.16.	0.870
dennd1b	rab35	ENSFHEP00000002379	ENSFHEP00000023714	DENN domain containing 1B.	RAB35, member RAS oncogene family b.	0.870
rab35	ENSFHEP00000007645	ENSFHEP00000023714	ENSFHEP00000007645	RAB35, member RAS oncogene family b.	UDENN domain-containing protein.	0.894
rab35	LOC105917109	ENSFHEP00000023714	ENSFHEP00000026160	RAB35, member RAS oncogene family b.	UDENN domain-containing protein.	0.894
rab35	LOC105938887	ENSFHEP00000023714	ENSFHEP00000030561	RAB35, member RAS oncogene family b.	Si:dkey-16l2.16.	0.934
rab35	dennd1b	ENSFHEP00000023714	ENSFHEP00000002379	RAB35, member RAS oncogene family b.	DENN domain containing 1B.	0.870