STRINGSTRING
mysm1 mysm1 cmc4 cmc4 kdm6a kdm6a polr2g polr2g HIST1H4J HIST1H4J paf1 paf1 LOC105930101 LOC105930101 supt6h supt6h cinp cinp LOC105932189 LOC105932189 polr2f polr2f LOC105916199 LOC105916199 ENSFHEP00000005390 ENSFHEP00000005390 ENSFHEP00000005562 ENSFHEP00000005562 polr2j polr2j ENSFHEP00000005843 ENSFHEP00000005843 ENSFHEP00000005943 ENSFHEP00000005943 ENSFHEP00000006008 ENSFHEP00000006008 ENSFHEP00000007488 ENSFHEP00000007488 supt4h1 supt4h1 LOC105929958 LOC105929958 ENSFHEP00000008506 ENSFHEP00000008506 nsd2 nsd2 LOC105916185 LOC105916185 ENSFHEP00000008974 ENSFHEP00000008974 ENSFHEP00000009414 ENSFHEP00000009414 ENSFHEP00000009416 ENSFHEP00000009416 LOC105937143 LOC105937143 ENSFHEP00000009465 ENSFHEP00000009465 ENSFHEP00000009497 ENSFHEP00000009497 tceanc2 tceanc2 ENSFHEP00000009577 ENSFHEP00000009577 ENSFHEP00000009587 ENSFHEP00000009587 ENSFHEP00000011769 ENSFHEP00000011769 KDM1B KDM1B mphosph8 mphosph8 LOC105932629 LOC105932629 polr2b polr2b tcea3 tcea3 polr2i polr2i LOC105916185-2 LOC105916185-2 LOC105940360 LOC105940360 LOC105933186 LOC105933186 LOC105933185 LOC105933185 srbd1 srbd1 ENSFHEP00000017931 ENSFHEP00000017931 LOC105921518 LOC105921518 ENSFHEP00000018304 ENSFHEP00000018304 ENSFHEP00000020981 ENSFHEP00000020981 polr2a polr2a LOC105935774 LOC105935774 ENSFHEP00000022555 ENSFHEP00000022555 ENSFHEP00000022779 ENSFHEP00000022779 rtf1 rtf1 birc6 birc6 ENSFHEP00000024487 ENSFHEP00000024487 ENSFHEP00000024749 ENSFHEP00000024749 ENSFHEP00000024753 ENSFHEP00000024753 ctr9 ctr9 leo1 leo1 glyr1 glyr1 ENSFHEP00000027007 ENSFHEP00000027007 ENSFHEP00000027386 ENSFHEP00000027386 ENSFHEP00000027407 ENSFHEP00000027407 LOC105936024 LOC105936024 ENSFHEP00000028115 ENSFHEP00000028115 ENSFHEP00000028161 ENSFHEP00000028161 LOC105935710 LOC105935710 supt5h supt5h ENSFHEP00000028662 ENSFHEP00000028662 tcea1 tcea1 cdc73 cdc73 LOC105916199-2 LOC105916199-2 ENSFHEP00000031253 ENSFHEP00000031253 H3-3B H3-3B polr2h polr2h eepd1 eepd1 polr2l polr2l LOC105939372 LOC105939372 polr2c polr2c supt16h supt16h iws1 iws1 LOC105926705 LOC105926705
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mysm1Myb-like, SWIRM and MPN domains 1. (649 aa)
cmc4Uncharacterized protein. (64 aa)
kdm6aLysine (K)-specific demethylase 6A. (1442 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
LOC105930101Histone H3; Belongs to the histone H3 family. (136 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1751 aa)
cinpCyclin-dependent kinase 2-interacting protein. (221 aa)
LOC105932189Lysine (K)-specific demethylase 6B, b. (1731 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (162 aa)
LOC105916199Histone H2B; Belongs to the histone H2B family. (67 aa)
ENSFHEP00000005390Histone H2A; Belongs to the histone H2A family. (234 aa)
ENSFHEP00000005562Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ENSFHEP00000005843Uncharacterized protein. (150 aa)
ENSFHEP00000005943annotation not available (93 aa)
ENSFHEP00000006008Uncharacterized protein. (57 aa)
ENSFHEP00000007488RPOL4c domain-containing protein. (106 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
LOC105929958Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (95 aa)
ENSFHEP00000008506Histone H2B; Belongs to the histone H2B family. (121 aa)
nsd2Nuclear receptor binding SET domain protein 2. (1306 aa)
LOC105916185Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSFHEP00000008974Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSFHEP00000009414Histone H3; Belongs to the histone H3 family. (120 aa)
ENSFHEP00000009416Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
LOC105937143Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSFHEP00000009465Histone H2A; Belongs to the histone H2A family. (137 aa)
ENSFHEP00000009497Histone H2A; Belongs to the histone H2A family. (137 aa)
tceanc2Uncharacterized protein. (214 aa)
ENSFHEP00000009577Histone H2B; Belongs to the histone H2B family. (113 aa)
ENSFHEP00000009587Uncharacterized protein. (84 aa)
ENSFHEP00000011769Histone H2A; Belongs to the histone H2A family. (139 aa)
KDM1BLysine demethylase 1B. (546 aa)
mphosph8Chromo domain-containing protein. (1440 aa)
LOC105932629POB3_N domain-containing protein. (104 aa)
polr2bPolymerase (RNA) II (DNA directed) polypeptide B; Belongs to the RNA polymerase beta chain family. (931 aa)
tcea3Transcription elongation factor A (SII), 3. (740 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC105916185-2Histone H2B 1/2. (124 aa)
LOC105940360Lysine (K)-specific demethylase 6B, a. (2071 aa)
LOC105933186Histone H3; Belongs to the histone H3 family. (136 aa)
LOC105933185Histone H3; Belongs to the histone H3 family. (137 aa)
srbd1S1 RNA binding domain 1. (1017 aa)
ENSFHEP00000017931Uncharacterized protein. (59 aa)
LOC105921518Lysine (K)-specific demethylase 6A, like. (1475 aa)
ENSFHEP00000018304Histone H2B; Belongs to the histone H2B family. (59 aa)
ENSFHEP00000020981TROVE domain-containing protein. (1243 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1916 aa)
LOC105935774Histone H2A; Belongs to the histone H2A family. (121 aa)
ENSFHEP00000022555HMG box domain-containing protein. (144 aa)
ENSFHEP00000022779Uncharacterized protein. (211 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (678 aa)
birc6Baculoviral IAP repeat containing 6. (4732 aa)
ENSFHEP00000024487Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (104 aa)
ENSFHEP00000024749Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSFHEP00000024753Uncharacterized protein. (57 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1151 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (637 aa)
glyr1Glyoxylate reductase 1 homolog (Arabidopsis). (507 aa)
ENSFHEP00000027007Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (105 aa)
ENSFHEP00000027386annotation not available (92 aa)
ENSFHEP00000027407Si:ch73-368j24.1. (93 aa)
LOC105936024Histone H2B; Belongs to the histone H2B family. (133 aa)
ENSFHEP00000028115Uncharacterized protein. (150 aa)
ENSFHEP00000028161Histone H2A; Belongs to the histone H2A family. (136 aa)
LOC105935710Histone H2B; Belongs to the histone H2B family. (116 aa)
supt5hTranscription elongation factor SPT5. (1041 aa)
ENSFHEP00000028662Histone H3; Belongs to the histone H3 family. (97 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (524 aa)
LOC105916199-2Histone H2B.3. (67 aa)
ENSFHEP00000031253Uncharacterized protein. (144 aa)
H3-3BHistone H3.3. (136 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
eepd1Endonuclease/exonuclease/phosphatase family domain containing 1. (556 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC105939372H2A histone family, member Y; Belongs to the histone H2A family. (391 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1029 aa)
iws1TFIIS N-terminal domain-containing protein. (584 aa)
LOC105926705Histone H3.3. (136 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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