6 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rapgef6	Rap guanine nucleotide exchange factor (GEF) 6. (1690 aa)
	LOC105918704	Ras-related protein Rap-1A. (184 aa)
	LOC105935262	RAP1A, member of RAS oncogene family a. (185 aa)
	tlnrd1	Talin rod domain containing 1. (355 aa)
	LOC105935996	Uncharacterized protein. (185 aa)
	LOC105930225	Uncharacterized protein. (483 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105918704	LOC105930225	ENSFHEP00000012353	ENSFHEP00000032972	Ras-related protein Rap-1A.	Uncharacterized protein.	0.906
LOC105918704	LOC105935262	ENSFHEP00000012353	ENSFHEP00000024043	Ras-related protein Rap-1A.	RAP1A, member of RAS oncogene family a.	0.947
LOC105918704	LOC105935996	ENSFHEP00000012353	ENSFHEP00000030994	Ras-related protein Rap-1A.	Uncharacterized protein.	0.947
LOC105918704	rapgef6	ENSFHEP00000012353	ENSFHEP00000011866	Ras-related protein Rap-1A.	Rap guanine nucleotide exchange factor (GEF) 6.	0.830
LOC105918704	tlnrd1	ENSFHEP00000012353	ENSFHEP00000027807	Ras-related protein Rap-1A.	Talin rod domain containing 1.	0.720
LOC105930225	LOC105918704	ENSFHEP00000032972	ENSFHEP00000012353	Uncharacterized protein.	Ras-related protein Rap-1A.	0.906
LOC105930225	LOC105935262	ENSFHEP00000032972	ENSFHEP00000024043	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.906
LOC105930225	LOC105935996	ENSFHEP00000032972	ENSFHEP00000030994	Uncharacterized protein.	Uncharacterized protein.	0.906
LOC105930225	tlnrd1	ENSFHEP00000032972	ENSFHEP00000027807	Uncharacterized protein.	Talin rod domain containing 1.	0.896
LOC105935262	LOC105918704	ENSFHEP00000024043	ENSFHEP00000012353	RAP1A, member of RAS oncogene family a.	Ras-related protein Rap-1A.	0.947
LOC105935262	LOC105930225	ENSFHEP00000024043	ENSFHEP00000032972	RAP1A, member of RAS oncogene family a.	Uncharacterized protein.	0.906
LOC105935262	LOC105935996	ENSFHEP00000024043	ENSFHEP00000030994	RAP1A, member of RAS oncogene family a.	Uncharacterized protein.	0.947
LOC105935262	rapgef6	ENSFHEP00000024043	ENSFHEP00000011866	RAP1A, member of RAS oncogene family a.	Rap guanine nucleotide exchange factor (GEF) 6.	0.968
LOC105935262	tlnrd1	ENSFHEP00000024043	ENSFHEP00000027807	RAP1A, member of RAS oncogene family a.	Talin rod domain containing 1.	0.720
LOC105935996	LOC105918704	ENSFHEP00000030994	ENSFHEP00000012353	Uncharacterized protein.	Ras-related protein Rap-1A.	0.947
LOC105935996	LOC105930225	ENSFHEP00000030994	ENSFHEP00000032972	Uncharacterized protein.	Uncharacterized protein.	0.906
LOC105935996	LOC105935262	ENSFHEP00000030994	ENSFHEP00000024043	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.947
LOC105935996	rapgef6	ENSFHEP00000030994	ENSFHEP00000011866	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 6.	0.968
LOC105935996	tlnrd1	ENSFHEP00000030994	ENSFHEP00000027807	Uncharacterized protein.	Talin rod domain containing 1.	0.720
rapgef6	LOC105918704	ENSFHEP00000011866	ENSFHEP00000012353	Rap guanine nucleotide exchange factor (GEF) 6.	Ras-related protein Rap-1A.	0.830