37 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rapgef5	Rap guanine nucleotide exchange factor (GEF) 5a. (864 aa)
	RASA2	RAS p21 protein activator 2. (816 aa)
	DIRAS1	DIRAS family GTPase 1. (199 aa)
	sos2	Son of sevenless homolog 2 (Drosophila). (1323 aa)
	ralbp1	RalA binding protein 1. (663 aa)
	mras	Muscle RAS oncogene homolog. (208 aa)
	arhgef12	Rho guanine nucleotide exchange factor (GEF) 12a. (1411 aa)
	LOC105936241	V-ral simian leukemia viral oncogene homolog Ba (ras related). (207 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1052 aa)
	rasa3	Ras GTPase-activating protein 3. (869 aa)
	SPRED2	Sprouty related EVH1 domain containing 2. (493 aa)
	ENSFHEP00000009730	Uncharacterized protein. (286 aa)
	ENSFHEP00000009767	RAS protein activator like 2. (842 aa)
	shoc2	SHOC2 leucine rich repeat scaffold protein. (523 aa)
	LOC105936050	Ral guanine nucleotide dissociation stimulator-like 2. (740 aa)
	LOC105919299	Sprouty related EVH1 domain containing 2a. (432 aa)
	gem	GTP binding protein overexpressed in skeletal muscle. (306 aa)
	RAP2B	Uncharacterized protein. (155 aa)
	spred1	Sprouty related EVH1 domain containing 1. (439 aa)
	LOC105939921	Zgc:55558. (187 aa)
	LOC105935263	RAP1 GTPase activating protein. (673 aa)
	LOC105933629	Uncharacterized protein. (183 aa)
	rap1gap2	RAP1 GTPase activating protein 2a. (732 aa)
	rgl1	Ral guanine nucleotide dissociation stimulator-like 1. (813 aa)
	LOC105918998	V-ral simian leukemia viral oncogene homolog Aa (ras related). (206 aa)
	nf1	Neurofibromin 1b. (2547 aa)
	LOC105924144	Ras-GEF domain-containing protein. (317 aa)
	ppp1cc	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (361 aa)
	LOC105917719	DIRAS family, GTP-binding RAS-like 1b. (200 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (870 aa)
	ENSFHEP00000028107	Uncharacterized protein. (82 aa)
	RAPGEF5	Uncharacterized protein. (492 aa)
	LOC105928040	Rap-GAP domain-containing protein. (628 aa)
	rap2b	RAP2B, member of RAS oncogene family. (183 aa)
	LOC105922981	Uncharacterized protein. (214 aa)
	LOC105939687	RAS related. (185 aa)
	ENSFHEP00000033928	Si:ch211-168d1.3. (619 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSFHEP00000009730	ENSFHEP00000027279	ENSFHEP00000009730	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.586
CSDE1	ENSFHEP00000009767	ENSFHEP00000027279	ENSFHEP00000009767	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 2.	0.586
CSDE1	ENSFHEP00000028107	ENSFHEP00000027279	ENSFHEP00000028107	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.783
CSDE1	ENSFHEP00000033928	ENSFHEP00000027279	ENSFHEP00000033928	Cold shock domain containing E1, RNA-binding.	Si:ch211-168d1.3.	0.830
CSDE1	LOC105919299	ENSFHEP00000027279	ENSFHEP00000012905	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2a.	0.677
CSDE1	LOC105924144	ENSFHEP00000027279	ENSFHEP00000023266	Cold shock domain containing E1, RNA-binding.	Ras-GEF domain-containing protein.	0.783
CSDE1	LOC105928040	ENSFHEP00000027279	ENSFHEP00000030944	Cold shock domain containing E1, RNA-binding.	Rap-GAP domain-containing protein.	0.568
CSDE1	LOC105935263	ENSFHEP00000027279	ENSFHEP00000019408	Cold shock domain containing E1, RNA-binding.	RAP1 GTPase activating protein.	0.568
CSDE1	LOC105936050	ENSFHEP00000027279	ENSFHEP00000012662	Cold shock domain containing E1, RNA-binding.	Ral guanine nucleotide dissociation stimulator-like 2.	0.783
CSDE1	LOC105939687	ENSFHEP00000027279	ENSFHEP00000032572	Cold shock domain containing E1, RNA-binding.	RAS related.	0.522
CSDE1	RAPGEF5	ENSFHEP00000027279	ENSFHEP00000029534	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.601
CSDE1	RASA2	ENSFHEP00000027279	ENSFHEP00000001708	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator 2.	0.658
CSDE1	SPRED2	ENSFHEP00000027279	ENSFHEP00000009437	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2.	0.677
CSDE1	arhgef12	ENSFHEP00000027279	ENSFHEP00000004952	Cold shock domain containing E1, RNA-binding.	Rho guanine nucleotide exchange factor (GEF) 12a.	0.582
CSDE1	mras	ENSFHEP00000027279	ENSFHEP00000003977	Cold shock domain containing E1, RNA-binding.	Muscle RAS oncogene homolog.	0.473
CSDE1	nf1	ENSFHEP00000027279	ENSFHEP00000022529	Cold shock domain containing E1, RNA-binding.	Neurofibromin 1b.	0.904
CSDE1	ralbp1	ENSFHEP00000027279	ENSFHEP00000003271	Cold shock domain containing E1, RNA-binding.	RalA binding protein 1.	0.891
CSDE1	rap1gap2	ENSFHEP00000027279	ENSFHEP00000021394	Cold shock domain containing E1, RNA-binding.	RAP1 GTPase activating protein 2a.	0.568
CSDE1	rapgef5	ENSFHEP00000027279	ENSFHEP00000000015	Cold shock domain containing E1, RNA-binding.	Rap guanine nucleotide exchange factor (GEF) 5a.	0.601
CSDE1	rasa1	ENSFHEP00000027279	ENSFHEP00000006337	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator (GTPase activating protein) 1a.	0.885