6 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105936241	V-ral simian leukemia viral oncogene homolog Ba (ras related). (207 aa)
	LOC105924144	Ras-GEF domain-containing protein. (317 aa)
	LOC105917719	DIRAS family, GTP-binding RAS-like 1b. (200 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (870 aa)
	ENSFHEP00000028107	Uncharacterized protein. (82 aa)
	ENSFHEP00000033928	Si:ch211-168d1.3. (619 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSFHEP00000028107	ENSFHEP00000027279	ENSFHEP00000028107	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.783
CSDE1	ENSFHEP00000033928	ENSFHEP00000027279	ENSFHEP00000033928	Cold shock domain containing E1, RNA-binding.	Si:ch211-168d1.3.	0.830
CSDE1	LOC105924144	ENSFHEP00000027279	ENSFHEP00000023266	Cold shock domain containing E1, RNA-binding.	Ras-GEF domain-containing protein.	0.783
ENSFHEP00000028107	CSDE1	ENSFHEP00000028107	ENSFHEP00000027279	Uncharacterized protein.	Cold shock domain containing E1, RNA-binding.	0.783
ENSFHEP00000028107	LOC105917719	ENSFHEP00000028107	ENSFHEP00000026756	Uncharacterized protein.	DIRAS family, GTP-binding RAS-like 1b.	0.663
ENSFHEP00000028107	LOC105936241	ENSFHEP00000028107	ENSFHEP00000006140	Uncharacterized protein.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.781
ENSFHEP00000033928	CSDE1	ENSFHEP00000033928	ENSFHEP00000027279	Si:ch211-168d1.3.	Cold shock domain containing E1, RNA-binding.	0.830
ENSFHEP00000033928	LOC105917719	ENSFHEP00000033928	ENSFHEP00000026756	Si:ch211-168d1.3.	DIRAS family, GTP-binding RAS-like 1b.	0.573
ENSFHEP00000033928	LOC105936241	ENSFHEP00000033928	ENSFHEP00000006140	Si:ch211-168d1.3.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.726
LOC105917719	ENSFHEP00000028107	ENSFHEP00000026756	ENSFHEP00000028107	DIRAS family, GTP-binding RAS-like 1b.	Uncharacterized protein.	0.663
LOC105917719	ENSFHEP00000033928	ENSFHEP00000026756	ENSFHEP00000033928	DIRAS family, GTP-binding RAS-like 1b.	Si:ch211-168d1.3.	0.573
LOC105917719	LOC105924144	ENSFHEP00000026756	ENSFHEP00000023266	DIRAS family, GTP-binding RAS-like 1b.	Ras-GEF domain-containing protein.	0.663
LOC105924144	CSDE1	ENSFHEP00000023266	ENSFHEP00000027279	Ras-GEF domain-containing protein.	Cold shock domain containing E1, RNA-binding.	0.783
LOC105924144	LOC105917719	ENSFHEP00000023266	ENSFHEP00000026756	Ras-GEF domain-containing protein.	DIRAS family, GTP-binding RAS-like 1b.	0.663
LOC105924144	LOC105936241	ENSFHEP00000023266	ENSFHEP00000006140	Ras-GEF domain-containing protein.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.781
LOC105936241	ENSFHEP00000028107	ENSFHEP00000006140	ENSFHEP00000028107	V-ral simian leukemia viral oncogene homolog Ba (ras related).	Uncharacterized protein.	0.781
LOC105936241	ENSFHEP00000033928	ENSFHEP00000006140	ENSFHEP00000033928	V-ral simian leukemia viral oncogene homolog Ba (ras related).	Si:ch211-168d1.3.	0.726
LOC105936241	LOC105924144	ENSFHEP00000006140	ENSFHEP00000023266	V-ral simian leukemia viral oncogene homolog Ba (ras related).	Ras-GEF domain-containing protein.	0.781