47 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105934208	Uncharacterized protein. (218 aa)
	LOC105917311	Ras-related protein Rab-1A. (203 aa)
	LOC105920855	Uncharacterized protein. (358 aa)
	LOC105932459	RAB11B, member RAS oncogene family, b. (218 aa)
	CDC42	Cell division control protein 42. (191 aa)
	rasl11b	RAS-like, family 11, member B. (248 aa)
	LOC105922981	Uncharacterized protein. (214 aa)
	LOC105929083	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	rap2b	RAP2B, member of RAS oncogene family. (183 aa)
	LOC105935996	Uncharacterized protein. (185 aa)
	LOC105936561	RAB4B, member RAS oncogene family. (213 aa)
	LOC105939972	Uncharacterized protein. (220 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC105935262	RAP1A, member of RAS oncogene family a. (185 aa)
	LOC105937254	Uncharacterized protein. (218 aa)
	LOC105918998	V-ral simian leukemia viral oncogene homolog Aa (ras related). (206 aa)
	LOC105932471	RAB11B, member RAS oncogene family, a. (218 aa)
	LOC105933629	Uncharacterized protein. (183 aa)
	LOC105933106	Ras-related protein Rab-1B. (214 aa)
	LOC105939921	Zgc:55558. (187 aa)
	rergl	RERG/RAS-like b. (198 aa)
	rasl11a	RAS-like, family 11, member A. (287 aa)
	LOC105938796	RAB11a, member RAS oncogene family. (215 aa)
	rasl12	RAS-like, family 12. (242 aa)
	rab27a	RAB27A, member RAS oncogene family. (220 aa)
	RAP2B	Uncharacterized protein. (155 aa)
	rerg	Ras-related and estrogen-regulated growth inhibitor. (200 aa)
	ENSFHEP00000014758	Uncharacterized protein. (112 aa)
	rap2c	RAP2C, member of RAS oncogene family. (183 aa)
	LOC105916947	ZRAB1B, member RAS oncogene family a. (201 aa)
	LOC105919311	Ras-related protein Rab-1A. (202 aa)
	LOC105930418	RAB5A, member RAS oncogene family, a. (216 aa)
	LOC105918704	Ras-related protein Rap-1A. (184 aa)
	LOC105931589	Uncharacterized protein. (191 aa)
	LOC105931543	Uncharacterized protein. (191 aa)
	rab27b	RAB27B, member RAS oncogene family. (218 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	LOC105936241	V-ral simian leukemia viral oncogene homolog Ba (ras related). (207 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	LOC105926030	RAB7a, member RAS oncogene family. (234 aa)
	mras	Muscle RAS oncogene homolog. (208 aa)
	LOC105928568	Cell division control protein 42. (191 aa)
	LOC105939790	RAB11a, member RAS oncogene family, like. (209 aa)
	LOC105934100	Cell division control protein 42. (191 aa)
	LOC105935780	RAB5B, member RAS oncogene family. (216 aa)
	LOC105922020	Zgc:171704. (211 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSFHEP00000014758	ENSFHEP00000032957	ENSFHEP00000014758	Cell division control protein 42.	Uncharacterized protein.	0.557
CDC42	LOC105918998	ENSFHEP00000032957	ENSFHEP00000022503	Cell division control protein 42.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.517
CDC42	LOC105922981	ENSFHEP00000032957	ENSFHEP00000032505	Cell division control protein 42.	Uncharacterized protein.	0.517
CDC42	LOC105926030	ENSFHEP00000032957	ENSFHEP00000004649	Cell division control protein 42.	RAB7a, member RAS oncogene family.	0.649
CDC42	LOC105929083	ENSFHEP00000032957	ENSFHEP00000032416	Cell division control protein 42.	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.	0.557
CDC42	LOC105931543	ENSFHEP00000032957	ENSFHEP00000011007	Cell division control protein 42.	Uncharacterized protein.	0.892
CDC42	LOC105931589	ENSFHEP00000032957	ENSFHEP00000011025	Cell division control protein 42.	Uncharacterized protein.	0.897
CDC42	LOC105934100	ENSFHEP00000032957	ENSFHEP00000001271	Cell division control protein 42.	Cell division control protein 42.	0.897
CDC42	LOC105936241	ENSFHEP00000032957	ENSFHEP00000006140	Cell division control protein 42.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.517
CDC42	LOC105939921	ENSFHEP00000032957	ENSFHEP00000018953	Cell division control protein 42.	Zgc:55558.	0.506
CDC42	RAB7A	ENSFHEP00000032957	ENSFHEP00000006077	Cell division control protein 42.	RAB7A, member RAS oncogene family.	0.649
CDC42	kras	ENSFHEP00000032957	ENSFHEP00000007955	Cell division control protein 42.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.506
ENSFHEP00000014758	CDC42	ENSFHEP00000014758	ENSFHEP00000032957	Uncharacterized protein.	Cell division control protein 42.	0.557
ENSFHEP00000014758	LOC105928568	ENSFHEP00000014758	ENSFHEP00000003652	Uncharacterized protein.	Cell division control protein 42.	0.557
ENSFHEP00000014758	LOC105931543	ENSFHEP00000014758	ENSFHEP00000011007	Uncharacterized protein.	Uncharacterized protein.	0.517
ENSFHEP00000014758	LOC105931589	ENSFHEP00000014758	ENSFHEP00000011025	Uncharacterized protein.	Uncharacterized protein.	0.517
ENSFHEP00000014758	LOC105934100	ENSFHEP00000014758	ENSFHEP00000001271	Uncharacterized protein.	Cell division control protein 42.	0.517
ENSFHEP00000014758	LOC105936561	ENSFHEP00000014758	ENSFHEP00000030897	Uncharacterized protein.	RAB4B, member RAS oncogene family.	0.563
ENSFHEP00000014758	rab4a	ENSFHEP00000014758	ENSFHEP00000009237	Uncharacterized protein.	RAB4a, member RAS oncogene family.	0.563
LOC105916947	LOC105920855	ENSFHEP00000013425	ENSFHEP00000034962	ZRAB1B, member RAS oncogene family a.	Uncharacterized protein.	0.416