39 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSFHEP00000002889	Fragile X mental retardation, autosomal homolog 1. (259 aa)
	ENSFHEP00000002902	Uncharacterized protein. (185 aa)
	gcn1	GCN1 activator of EIF2AK4. (2578 aa)
	LOC105932269	Transcription factor BTF3; Belongs to the NAC-beta family. (158 aa)
	rps28	Ribosomal protein S28. (69 aa)
	btf3	Transcription factor BTF3; Belongs to the NAC-beta family. (162 aa)
	msi1	Musashi RNA binding protein 1. (352 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	BTF3	Transcription factor BTF3; Belongs to the NAC-beta family. (162 aa)
	rpl6	Ribosomal protein L6. (259 aa)
	larp6	La ribonucleoprotein domain family, member 6a. (684 aa)
	LOC105930999	HTH La-type RNA-binding domain-containing protein. (411 aa)
	ENSFHEP00000009615	DRBM domain-containing protein. (391 aa)
	NR0B1	Nuclear receptor subfamily 0 group B member 1. (297 aa)
	LOC105933211	Proteasome subunit alpha type. (257 aa)
	abcf1	ATP-binding cassette, sub-family F (GCN20), member 1. (761 aa)
	fmr1	Fragile X mental retardation 1. (604 aa)
	rwdd4	RWD domain containing 4. (185 aa)
	LOC105925550	Fragile X mental retardation, autosomal homolog 2. (669 aa)
	atxn2	Ataxin 2. (1010 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (147 aa)
	RPS29	Ribosomal protein S29. (66 aa)
	rps21	Ribosomal protein S21. (137 aa)
	EIF2AK4	Eukaryotic translation initiation factor 2 alpha kinase 4. (1654 aa)
	UPF2	UPF2 regulator of nonsense mediated mRNA decay. (1296 aa)
	ENSFHEP00000025750	Ribosomal_L18e/L15P domain-containing protein. (69 aa)
	mcrs1	Microspherule protein 1. (455 aa)
	rwdd1	RWD domain containing 1. (224 aa)
	LOC105926512	High density lipoprotein binding protein a. (1272 aa)
	LOC105927806	Transcription factor BTF3; Belongs to the NAC-beta family. (191 aa)
	lin28a	Lin-28 homolog A. (202 aa)
	impact	Impact RWD domain protein. (339 aa)
	LOC105934672	High density lipoprotein binding protein b. (1226 aa)
	LOC105930638	Proteasome subunit alpha type. (246 aa)
	nufip2	Nuclear FMR1 interacting protein 2. (637 aa)
	msi2	Musashi RNA-binding protein 2a. (408 aa)
	rpl18	Ribosomal protein L18. (190 aa)
	vbp1	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (195 aa)
	LOC105931871	Uncharacterized protein. (350 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTF3	ENSFHEP00000025750	ENSFHEP00000005958	ENSFHEP00000025750	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal_L18e/L15P domain-containing protein.	0.851
BTF3	LOC105927806	ENSFHEP00000005958	ENSFHEP00000035117	Transcription factor BTF3; Belongs to the NAC-beta family.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.455
BTF3	LOC105932269	ENSFHEP00000005958	ENSFHEP00000004160	Transcription factor BTF3; Belongs to the NAC-beta family.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.454
BTF3	RPS29	ENSFHEP00000005958	ENSFHEP00000032120	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein S29.	0.602
BTF3	rpl18	ENSFHEP00000005958	ENSFHEP00000034815	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein L18.	0.851
BTF3	rpl6	ENSFHEP00000005958	ENSFHEP00000007839	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein L6.	0.952
BTF3	rps21	ENSFHEP00000005958	ENSFHEP00000030534	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein S21.	0.633
BTF3	rps23	ENSFHEP00000005958	ENSFHEP00000032549	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.592
BTF3	rps28	ENSFHEP00000005958	ENSFHEP00000004933	Transcription factor BTF3; Belongs to the NAC-beta family.	Ribosomal protein S28.	0.561
EIF2AK4	abcf1	ENSFHEP00000029640	ENSFHEP00000016193	Eukaryotic translation initiation factor 2 alpha kinase 4.	ATP-binding cassette, sub-family F (GCN20), member 1.	0.557
EIF2AK4	gcn1	ENSFHEP00000029640	ENSFHEP00000003837	Eukaryotic translation initiation factor 2 alpha kinase 4.	GCN1 activator of EIF2AK4.	0.880
EIF2AK4	impact	ENSFHEP00000029640	ENSFHEP00000000388	Eukaryotic translation initiation factor 2 alpha kinase 4.	Impact RWD domain protein.	0.548
EIF2AK4	rwdd1	ENSFHEP00000029640	ENSFHEP00000025672	Eukaryotic translation initiation factor 2 alpha kinase 4.	RWD domain containing 1.	0.438
ENSFHEP00000002889	ENSFHEP00000002902	ENSFHEP00000002889	ENSFHEP00000002902	Fragile X mental retardation, autosomal homolog 1.	Uncharacterized protein.	0.930
ENSFHEP00000002889	LOC105925550	ENSFHEP00000002889	ENSFHEP00000021059	Fragile X mental retardation, autosomal homolog 1.	Fragile X mental retardation, autosomal homolog 2.	0.914
ENSFHEP00000002889	atxn2	ENSFHEP00000002889	ENSFHEP00000032845	Fragile X mental retardation, autosomal homolog 1.	Ataxin 2.	0.445
ENSFHEP00000002889	fmr1	ENSFHEP00000002889	ENSFHEP00000020177	Fragile X mental retardation, autosomal homolog 1.	Fragile X mental retardation 1.	0.966
ENSFHEP00000002889	nufip2	ENSFHEP00000002889	ENSFHEP00000002036	Fragile X mental retardation, autosomal homolog 1.	Nuclear FMR1 interacting protein 2.	0.441
ENSFHEP00000002902	ENSFHEP00000002889	ENSFHEP00000002902	ENSFHEP00000002889	Uncharacterized protein.	Fragile X mental retardation, autosomal homolog 1.	0.930
ENSFHEP00000002902	LOC105925550	ENSFHEP00000002902	ENSFHEP00000021059	Uncharacterized protein.	Fragile X mental retardation, autosomal homolog 2.	0.903