86 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105925555	Sestrin 2. (558 aa)
	nod1	Nucleotide-binding oligomerization domain containing 1. (941 aa)
	ENSFHEP00000025475	WW domain-containing protein. (184 aa)
	ENSFHEP00000025525	Uncharacterized protein. (107 aa)
	LOC105920118	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (436 aa)
	rb1cc1	RB1-inducible coiled-coil 1. (1611 aa)
	tp53inp1	Tumor protein p53 inducible nuclear protein 1. (286 aa)
	LOC105925715	Si:zfos-80g12.1. (371 aa)
	flcn	Folliculin. (564 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (425 aa)
	LOC105924849	Serine palmitoyltransferase, long chain base subunit 1. (230 aa)
	LOC105924834	RUN domain-containing protein. (983 aa)
	ENSFHEP00000033314	ANK_REP_REGION domain-containing protein. (762 aa)
	rab3gap2	RAB3 GTPase activating protein subunit 2 (non-catalytic). (1369 aa)
	epm2a	EPM2A glucan phosphatase, laforin. (316 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (618 aa)
	ulk2	Unc-51 like autophagy activating kinase 2. (1067 aa)
	LOC105921986	Si:dkey-206d17.12. (588 aa)
	wdr24	WD repeat domain 24. (706 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (564 aa)
	stk11	Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (436 aa)
	nprl3	Nitrogen permease regulator 3-like protein. (599 aa)
	pip4k2a	Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a. (443 aa)
	rnf152	Ring finger protein 152. (173 aa)
	lrsam1	Leucine rich repeat and sterile alpha motif containing 1. (734 aa)
	hspb8	Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family. (221 aa)
	LOC105918399	Two pore calcium channel protein 1. (771 aa)
	SNX4	Sorting nexin 4. (350 aa)
	depdc5	DEP domain containing 5. (883 aa)
	LOC105937290	Short coiled-coil protein. (104 aa)
	bcl2l11	Uncharacterized protein. (239 aa)
	pink1	PTEN induced kinase 1. (585 aa)
	ENSFHEP00000006719	Ubiquitin-like domain-containing protein. (148 aa)
	sptlc1	Serine palmitoyltransferase, long chain base subunit 1. (251 aa)
	vps13d	Vacuolar protein sorting 13 homolog D. (3545 aa)
	LOC105931776	Sorting nexin 4. (418 aa)
	LOC105919467	TSC complex subunit 1. (1034 aa)
	becn1	Beclin 1, autophagy related. (448 aa)
	tsc2	TSC complex subunit 2. (1700 aa)
	sh3bp4	SH3-domain binding protein 4. (965 aa)
	gsk3a	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	tmem59	Transmembrane protein 59. (325 aa)
	PIP4K2B	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. (413 aa)
	nod2	Nucleotide-binding oligomerization domain containing 2. (1000 aa)
	ENSFHEP00000009916	Unc-51 like autophagy activating kinase 1. (944 aa)
	svip	Si:ch73-147o17.1. (88 aa)
	tpcn1	Two pore segment channel 1. (836 aa)
	ENSFHEP00000010671	GOLD domain-containing protein. (158 aa)
	wdr45	WD repeat domain 45. (358 aa)
	LOC105917598	Sorting nexin 7. (380 aa)
	snx30	Sorting nexin family member 30. (400 aa)
	LOC105917024	SH3-domain binding protein 4a. (960 aa)
	scoc	Short coiled-coil protein a. (80 aa)
	LOC105936058	Uncharacterized protein. (332 aa)
	htt	Huntingtin. (3077 aa)
	LOC105927446	TSC complex subunit 1b. (1254 aa)
	sting1	Stimulator of interferon genes protein. (400 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (576 aa)
	ambra1	Autophagy/beclin-1 regulator 1b. (769 aa)
	ENSFHEP00000017385	Uncharacterized protein. (57 aa)
	ENSFHEP00000017412	Uncharacterized protein. (55 aa)
	nprl2	NPR2 like, GATOR1 complex subunit. (274 aa)
	ENSFHEP00000017833	Uncharacterized protein. (372 aa)
	LOC105928511	Metadherin a. (469 aa)
	LOC105922219	RBR-type E3 ubiquitin transferase. (169 aa)
	bnip3	BCL2 interacting protein 3. (204 aa)
	LOC105933104	Forkhead box A3. (463 aa)
	ENSFHEP00000018558	Protein kinase domain-containing protein. (516 aa)
	tfeb	Transcription factor EB. (539 aa)
	tp53inp2	Uncharacterized protein. (291 aa)
	LOC105924518	FYVE and coiled-coil domain containing 1b. (908 aa)
	fyco1	FYVE and coiled-coil domain containing 1a. (1510 aa)
	sesn1	Sestrin 1. (548 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (557 aa)
	LOC105928776	Unc-51 like autophagy activating kinase 1a. (695 aa)
	gpsm1	G protein signaling modulator 1b. (662 aa)
	LOC105938715	RING-type domain-containing protein. (602 aa)
	rnf31	Ring finger protein 31. (987 aa)
	LOC105939748	Zgc:100846. (441 aa)
	dcn	Decorin; May affect the rate of fibrils formation. (362 aa)
	trim32	Tripartite motif containing 32. (680 aa)
	calcoco2	Calcium binding and coiled-coil domain 2. (598 aa)
	ufl1	UFM1-specific ligase 1. (795 aa)
	fbxo7	F-box only protein 7. (468 aa)
	LOC105929979	Zgc:73226. (181 aa)
	sirt1	Sirtuin 1. (719 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000006719	ENSFHEP00000018558	ENSFHEP00000006719	ENSFHEP00000018558	Ubiquitin-like domain-containing protein.	Protein kinase domain-containing protein.	0.444
ENSFHEP00000006719	ENSFHEP00000033314	ENSFHEP00000006719	ENSFHEP00000033314	Ubiquitin-like domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.444
ENSFHEP00000006719	LOC105919467	ENSFHEP00000006719	ENSFHEP00000007990	Ubiquitin-like domain-containing protein.	TSC complex subunit 1.	0.400
ENSFHEP00000006719	LOC105922219	ENSFHEP00000006719	ENSFHEP00000018097	Ubiquitin-like domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.805
ENSFHEP00000006719	LOC105927446	ENSFHEP00000006719	ENSFHEP00000013621	Ubiquitin-like domain-containing protein.	TSC complex subunit 1b.	0.400
ENSFHEP00000006719	ambra1	ENSFHEP00000006719	ENSFHEP00000017211	Ubiquitin-like domain-containing protein.	Autophagy/beclin-1 regulator 1b.	0.874
ENSFHEP00000006719	becn1	ENSFHEP00000006719	ENSFHEP00000008435	Ubiquitin-like domain-containing protein.	Beclin 1, autophagy related.	0.722
ENSFHEP00000006719	bnip3	ENSFHEP00000006719	ENSFHEP00000018330	Ubiquitin-like domain-containing protein.	BCL2 interacting protein 3.	0.426
ENSFHEP00000006719	fbxo7	ENSFHEP00000006719	ENSFHEP00000024946	Ubiquitin-like domain-containing protein.	F-box only protein 7.	0.587
ENSFHEP00000006719	htt	ENSFHEP00000006719	ENSFHEP00000013147	Ubiquitin-like domain-containing protein.	Huntingtin.	0.605
ENSFHEP00000006719	pink1	ENSFHEP00000006719	ENSFHEP00000006364	Ubiquitin-like domain-containing protein.	PTEN induced kinase 1.	0.989
ENSFHEP00000006719	ripk2	ENSFHEP00000006719	ENSFHEP00000015251	Ubiquitin-like domain-containing protein.	Receptor-interacting serine-threonine kinase 2.	0.501
ENSFHEP00000009916	LOC105917598	ENSFHEP00000009916	ENSFHEP00000011265	Unc-51 like autophagy activating kinase 1.	Sorting nexin 7.	0.442
ENSFHEP00000009916	LOC105928776	ENSFHEP00000009916	ENSFHEP00000021574	Unc-51 like autophagy activating kinase 1.	Unc-51 like autophagy activating kinase 1a.	0.944
ENSFHEP00000009916	LOC105931776	ENSFHEP00000009916	ENSFHEP00000007181	Unc-51 like autophagy activating kinase 1.	Sorting nexin 4.	0.492
ENSFHEP00000009916	LOC105939748	ENSFHEP00000009916	ENSFHEP00000023346	Unc-51 like autophagy activating kinase 1.	Zgc:100846.	0.972
ENSFHEP00000009916	SNX4	ENSFHEP00000009916	ENSFHEP00000004756	Unc-51 like autophagy activating kinase 1.	Sorting nexin 4.	0.492
ENSFHEP00000009916	ambra1	ENSFHEP00000009916	ENSFHEP00000017211	Unc-51 like autophagy activating kinase 1.	Autophagy/beclin-1 regulator 1b.	0.973
ENSFHEP00000009916	becn1	ENSFHEP00000009916	ENSFHEP00000008435	Unc-51 like autophagy activating kinase 1.	Beclin 1, autophagy related.	0.996
ENSFHEP00000009916	prkaa1	ENSFHEP00000009916	ENSFHEP00000001304	Unc-51 like autophagy activating kinase 1.	Non-specific serine/threonine protein kinase.	0.707