(27 nodes) Regulation of glycoprotein biosynthetic process network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	itm2b	Integral membrane protein 2Bb. (262 aa)
	LOC105919611	GATA binding protein 1a. (424 aa)
	igf1	Insulin growth factor I-like protein. (185 aa)
	NCSTN	Nicastrin. (645 aa)
	ramp1	Receptor activity modifying protein 1. (150 aa)
	LOC105928170	SCY domain-containing protein. (110 aa)
	LOC105916681	Integral membrane protein 2Cb. (256 aa)
	ENSFHEP00000006046	Uncharacterized protein. (108 aa)
	LOC105931052	Receptor activity-modifying protein 1. (151 aa)
	crppa	CDP-L-ribitol pyrophosphorylase A. (447 aa)
	ENSFHEP00000009335	Uncharacterized protein. (190 aa)
	necab1	N-terminal EF-hand calcium binding protein 1. (347 aa)
	ITM2C	Integral membrane protein 2C. (290 aa)
	ENSFHEP00000013502	BRICHOS domain-containing protein. (72 aa)
	ITM2A	Integral membrane protein 2A. (237 aa)
	LOC105933757	Uncharacterized protein. (309 aa)
	bcl2	BCL2 apoptosis regulator b. (230 aa)
	tm9sf2	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (666 aa)
	LOC105935976	N-terminal EF-hand calcium binding protein 3. (259 aa)
	ENSFHEP00000015296	EF-hand domain-containing protein. (90 aa)
	acot8	Acyl-CoA thioesterase 8. (338 aa)
	ENSFHEP00000016285	Uncharacterized protein. (148 aa)
	pxylp1	2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family. (488 aa)
	pawr	PRKC apoptosis WT1 regulator protein. (337 aa)
	acer2	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (295 aa)
	chp1	Calcineurin-like EF-hand protein 1. (187 aa)
	LOC105920540	Uncharacterized protein. (271 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000015296	LOC105935976	ENSFHEP00000015296	ENSFHEP00000015287	EF-hand domain-containing protein.	N-terminal EF-hand calcium binding protein 3.	0.818
ENSFHEP00000015296	NCSTN	ENSFHEP00000015296	ENSFHEP00000003640	EF-hand domain-containing protein.	Nicastrin.	0.506
LOC105931052	ramp1	ENSFHEP00000007194	ENSFHEP00000004239	Receptor activity-modifying protein 1.	Receptor activity modifying protein 1.	0.935
LOC105933757	NCSTN	ENSFHEP00000014362	ENSFHEP00000003640	Uncharacterized protein.	Nicastrin.	0.506
LOC105935976	ENSFHEP00000015296	ENSFHEP00000015287	ENSFHEP00000015296	N-terminal EF-hand calcium binding protein 3.	EF-hand domain-containing protein.	0.818
LOC105935976	NCSTN	ENSFHEP00000015287	ENSFHEP00000003640	N-terminal EF-hand calcium binding protein 3.	Nicastrin.	0.506
NCSTN	ENSFHEP00000015296	ENSFHEP00000003640	ENSFHEP00000015296	Nicastrin.	EF-hand domain-containing protein.	0.506
NCSTN	LOC105933757	ENSFHEP00000003640	ENSFHEP00000014362	Nicastrin.	Uncharacterized protein.	0.506
NCSTN	LOC105935976	ENSFHEP00000003640	ENSFHEP00000015287	Nicastrin.	N-terminal EF-hand calcium binding protein 3.	0.506
NCSTN	necab1	ENSFHEP00000003640	ENSFHEP00000011712	Nicastrin.	N-terminal EF-hand calcium binding protein 1.	0.506
necab1	NCSTN	ENSFHEP00000011712	ENSFHEP00000003640	N-terminal EF-hand calcium binding protein 1.	Nicastrin.	0.506
ramp1	LOC105931052	ENSFHEP00000004239	ENSFHEP00000007194	Receptor activity modifying protein 1.	Receptor activity-modifying protein 1.	0.935