STRINGSTRING
shh shh dhh dhh oma1 oma1 pcsk9 pcsk9 pcsk2 pcsk2 LOC105917255 LOC105917255 casp6 casp6 LOC105931887 LOC105931887 LOC105922596 LOC105922596 ENSFHEP00000009639 ENSFHEP00000009639 myrfl myrfl sprtn sprtn LOC105916426 LOC105916426 pcsk1 pcsk1 ENSFHEP00000035022 ENSFHEP00000035022
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
dhhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (447 aa)
oma1OMA1 zinc metallopeptidase. (516 aa)
pcsk9Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (674 aa)
pcsk2Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family. (593 aa)
LOC105917255P53-induced death domain-containing protein 1. (977 aa)
casp6Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (294 aa)
LOC105931887Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (434 aa)
LOC105922596Tantalus domain-containing protein. (562 aa)
ENSFHEP00000009639Uncharacterized protein. (174 aa)
myrflMyelin regulatory factor like. (702 aa)
sprtnSprT-like N-terminal domain. (460 aa)
LOC105916426Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
pcsk1Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (773 aa)
ENSFHEP00000035022Myelin regulatory factor. (578 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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