(13 nodes) Apoptotic nuclear changes network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSFHEP00000017807	Uncharacterized protein. (517 aa)
	ENSFHEP00000031539	Apoptotic chromatin condensation inducer 1a. (573 aa)
	sharpin	SHANK-associated RH domain interacting protein. (436 aa)
	blcap	Bladder cancer associated protein. (87 aa)
	endog	Endonuclease. (301 aa)
	ENSFHEP00000015842	SAP domain-containing protein. (1130 aa)
	dffb	DNA fragmentation factor, beta polypeptide (caspase-activated DNase). (345 aa)
	dicer1	Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1793 aa)
	dnase2	Deoxyribonuclease II, lysosomal. (371 aa)
	dedd2	Death effector domain containing 2. (280 aa)
	cdk5rap3	CDK5 regulatory subunit associated protein 3. (515 aa)
	LOC105928623	Uncharacterized protein. (244 aa)
	LOC105928620	Deoxyribonuclease II beta. (363 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000015842	ENSFHEP00000017807	ENSFHEP00000015842	ENSFHEP00000017807	SAP domain-containing protein.	Uncharacterized protein.	0.994
ENSFHEP00000015842	ENSFHEP00000031539	ENSFHEP00000015842	ENSFHEP00000031539	SAP domain-containing protein.	Apoptotic chromatin condensation inducer 1a.	0.900
ENSFHEP00000017807	ENSFHEP00000015842	ENSFHEP00000017807	ENSFHEP00000015842	Uncharacterized protein.	SAP domain-containing protein.	0.994
ENSFHEP00000017807	ENSFHEP00000031539	ENSFHEP00000017807	ENSFHEP00000031539	Uncharacterized protein.	Apoptotic chromatin condensation inducer 1a.	0.903
ENSFHEP00000031539	ENSFHEP00000015842	ENSFHEP00000031539	ENSFHEP00000015842	Apoptotic chromatin condensation inducer 1a.	SAP domain-containing protein.	0.900
ENSFHEP00000031539	ENSFHEP00000017807	ENSFHEP00000031539	ENSFHEP00000017807	Apoptotic chromatin condensation inducer 1a.	Uncharacterized protein.	0.903
LOC105928620	LOC105928623	ENSFHEP00000003253	ENSFHEP00000003325	Deoxyribonuclease II beta.	Uncharacterized protein.	0.905
LOC105928620	dnase2	ENSFHEP00000003253	ENSFHEP00000012675	Deoxyribonuclease II beta.	Deoxyribonuclease II, lysosomal.	0.906
LOC105928623	LOC105928620	ENSFHEP00000003325	ENSFHEP00000003253	Uncharacterized protein.	Deoxyribonuclease II beta.	0.905
LOC105928623	dnase2	ENSFHEP00000003325	ENSFHEP00000012675	Uncharacterized protein.	Deoxyribonuclease II, lysosomal.	0.906
dnase2	LOC105928620	ENSFHEP00000012675	ENSFHEP00000003253	Deoxyribonuclease II, lysosomal.	Deoxyribonuclease II beta.	0.906
dnase2	LOC105928623	ENSFHEP00000012675	ENSFHEP00000003325	Deoxyribonuclease II, lysosomal.	Uncharacterized protein.	0.906