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lcmt2 lcmt2 trmt2b trmt2b wdr6 wdr6 nsun3 nsun3 trmt10b trmt10b LOC105926940 LOC105926940 trmt10c trmt10c trmt112 trmt112 nsun6 nsun6 ftsj1 ftsj1 trmt5 trmt5 tarbp1 tarbp1 ENSFHEP00000024323 ENSFHEP00000024323 trmt10a trmt10a tyw3 tyw3 lyrm9 lyrm9 trmt13 trmt13 gtpbp3 gtpbp3 LOC105925644 LOC105925644 thada thada trmt6 trmt6 trmo trmo LOC105922263 LOC105922263 dalrd3 dalrd3 nsun2 nsun2 trmt12 trmt12 ENSFHEP00000014631 ENSFHEP00000014631 trmt1l trmt1l LOC105932742 LOC105932742 trmt1 trmt1 gtpbp6 gtpbp6 trmt9b trmt9b thumpd2 thumpd2 hsd17b10 hsd17b10 trmt61a trmt61a mettl1 mettl1 trmt2a trmt2a thumpd3 thumpd3 LOC105938095 LOC105938095 mettl6 mettl6 alkbh8 alkbh8 trmt11 trmt11 trmt44 trmt44
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lcmt2Leucine carboxyl methyltransferase 2. (668 aa)
trmt2btRNA (Uracil(54)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (531 aa)
wdr6WD repeat domain 6. (1097 aa)
nsun3NOP2/Sun RNA methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (454 aa)
trmt10btRNA methyltransferase 10B. (332 aa)
LOC105926940Si:ch211-225b11.4. (1620 aa)
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (507 aa)
trmt112tRNA methyltransferase subunit 11-2. (123 aa)
nsun6NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (462 aa)
ftsj1Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (320 aa)
trmt5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (473 aa)
tarbp1Si:dkey-85a20.4. (1481 aa)
ENSFHEP00000024323Uncharacterized protein. (245 aa)
trmt10atRNA methyltransferase 10A. (304 aa)
tyw3tRNA-yW synthesizing protein 3 homolog (S. cerevisiae). (248 aa)
lyrm9LYR motif-containing protein 9; Belongs to the complex I LYR family. (104 aa)
trmt13tRNA methyltransferase 13 homolog. (406 aa)
gtpbp3GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (514 aa)
LOC105925644tRNA methyltransferase 61B. (483 aa)
thadaTHADA armadillo repeat containing. (1928 aa)
trmt6tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (469 aa)
trmotRNA methyltransferase O. (446 aa)
LOC105922263Methyltransferase like 8. (300 aa)
dalrd3DALR anticodon binding domain containing 3. (602 aa)
nsun2NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (764 aa)
trmt12tRNA methyltransferase 12 homolog. (368 aa)
ENSFHEP00000014631Uncharacterized protein. (77 aa)
trmt1ltRNA (guanine(26)-N(2))-dimethyltransferase. (534 aa)
LOC105932742Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (368 aa)
trmt1tRNA (guanine(26)-N(2))-dimethyltransferase. (650 aa)
gtpbp6GTP binding protein 6 (putative). (518 aa)
trmt9btRNA methyltransferase 9B. (430 aa)
thumpd2THUMP domain containing 2. (528 aa)
hsd17b10Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
trmt61atRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (307 aa)
mettl1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (294 aa)
trmt2atRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (607 aa)
thumpd3THUMP domain containing 3. (498 aa)
LOC105938095Zgc:109986. (300 aa)
mettl6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (316 aa)
alkbh8AlkB homolog 8, tRNA methyltransferase. (693 aa)
trmt11tRNA methyltransferase 11 homolog. (451 aa)
trmt44tRNA (Uracil-O(2)-)-methyltransferase, putative. (629 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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