107 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105918222	Tumor susceptibility 101a. (416 aa)
	snx3	Sorting nexin 3. (162 aa)
	gripap1	GRIP1 associated protein 1. (832 aa)
	LOC105935780	RAB5B, member RAS oncogene family. (216 aa)
	snx21	Sorting nexin family member 21. (418 aa)
	LOC105923452	PIPK domain-containing protein. (305 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (284 aa)
	LOC105938682	CAP-ZIP_m domain-containing protein. (1448 aa)
	LOC105915606	Zinc finger, FYVE domain containing 16. (1413 aa)
	LOC105924331	Ig-like domain-containing protein. (224 aa)
	lamp3	Uncharacterized protein. (211 aa)
	wdr81	WD repeat domain 81. (2058 aa)
	HPS6	HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (797 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (185 aa)
	washc1	WAS protein family homolog 1. (511 aa)
	LOC105915268	Vesicle-associated membrane protein 8 (endobrevin). (124 aa)
	LOC105933269	V-SNARE coiled-coil homology domain-containing protein. (123 aa)
	dnajc13	J domain-containing protein. (2031 aa)
	vti1b	Vesicle transport through interaction with t-SNAREs 1B. (227 aa)
	LOC105938046	Uncharacterized protein. (648 aa)
	LOC105918399	Two pore calcium channel protein 1. (771 aa)
	SNX4	Sorting nexin 4. (350 aa)
	LOC105931776	Sorting nexin 4. (418 aa)
	LOC105920057	LITAF domain-containing protein. (147 aa)
	cftr	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1503 aa)
	LOC110366958	Zgc:123278. (186 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	LOC105917092	Si:ch211-202h22.8. (144 aa)
	nsg2	Neuronal vesicle trafficking associated 2. (180 aa)
	ENSFHEP00000010079	Uncharacterized protein. (897 aa)
	LOC105917066	Clavesin 1. (314 aa)
	tpcn1	Two pore segment channel 1. (836 aa)
	LOC105935123	Sorting nexin 27a. (561 aa)
	LOC105932087	Uncharacterized protein. (509 aa)
	LOC105917598	Sorting nexin 7. (380 aa)
	snx30	Sorting nexin family member 30. (400 aa)
	rab21	RAB21, member RAS oncogene family. (218 aa)
	ENSFHEP00000012478	LITAF domain-containing protein. (149 aa)
	tmem165	GDT1 family protein. (303 aa)
	LOC105930418	RAB5A, member RAS oncogene family, a. (216 aa)
	LOC110366401	LITAF domain-containing protein. (140 aa)
	LOC105919902	Sialidase 3 (membrane sialidase), tandem duplicate 1. (410 aa)
	ENSFHEP00000013084	Uncharacterized protein. (134 aa)
	plekhf2	Pleckstrin homology domain containing, family F (with FYVE domain) member 2. (244 aa)
	pdlim4	PDZ and LIM domain protein 4. (364 aa)
	steap4	STEAP family member 4. (472 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (1587 aa)
	snx8	Sorting nexin 8a. (521 aa)
	ocrl	OCRL inositol polyphosphate-5-phosphatase. (938 aa)
	LOC105926216	Sorting nexin 1a. (644 aa)
	snx16	Sorting nexin 16. (364 aa)
	RAB14	RAB14, member RAS oncogene family. (197 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (274 aa)
	LOC105929619	Amino acid transporter. (491 aa)
	abcb6	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (854 aa)
	SNX27	Sorting nexin 27. (578 aa)
	ENSFHEP00000019842	Syntaxin 12; Belongs to the syntaxin family. (275 aa)
	LOC105925645	Amino acid transporter. (479 aa)
	ENSFHEP00000019968	Sb:cb470. (238 aa)
	ENSFHEP00000021333	Clavesin 2. (209 aa)
	inpp5b	Inositol polyphosphate-5-phosphatase B. (905 aa)
	snx19	Sorting nexin 19b. (980 aa)
	sorl1	Sortilin-related receptor, L(DLR class) A repeats containing. (2130 aa)
	appl2	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (665 aa)
	LOC105936377	Uncharacterized protein. (485 aa)
	cln3	Battenin. (439 aa)
	mtmr2	Myotubularin related protein 2. (604 aa)
	LOC105921450	Prostate transmembrane protein, androgen induced 1. (324 aa)
	slc1a1	Amino acid transporter. (494 aa)
	LOC105929333	Sorting nexin 19a. (944 aa)
	gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (732 aa)
	LOC105936801	Phospholipid phosphatase 2b. (306 aa)
	zfyve9	Zinc finger, FYVE domain containing 9a. (1175 aa)
	TMEM163	Transmembrane protein 163a. (291 aa)
	LOC105916639	Uncharacterized protein. (215 aa)
	zfyve28	Zinc finger, FYVE domain containing 28. (1006 aa)
	ENSFHEP00000026378	LITAF domain-containing protein. (221 aa)
	ENSFHEP00000026750	Membrane-associated ring finger (C3HC4) 1. (457 aa)
	plpp2	Lipid phosphate phosphohydrolase 2. (296 aa)
	LOC105940080	Uncharacterized protein. (76 aa)
	ENSFHEP00000027833	VPS41 subunit of HOPS complex. (603 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC105919338	Uncharacterized protein. (568 aa)
	wdr91	WD repeat domain 91. (701 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (713 aa)
	snx1	Sorting nexin 1b. (513 aa)
	mon2	MON2 homolog, regulator of endosome-to-Golgi trafficking. (1709 aa)
	LOC105939972	Uncharacterized protein. (220 aa)
	LOC105931510	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (636 aa)
	mmgt1	Membrane magnesium transporter 1. (130 aa)
	gpnmb	Glycoprotein (transmembrane) nmb. (621 aa)
	ENSFHEP00000030519	RING-type domain-containing protein. (179 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (509 aa)
	ENSFHEP00000031453	STEAP family member 4. (392 aa)
	ENSFHEP00000031933	Ig-like domain-containing protein. (173 aa)
	ldlrad4	Low density lipoprotein receptor class A domain containing 4b. (297 aa)
	tmem163	Transmembrane protein 163. (289 aa)
	snx20	Sorting nexin 20. (290 aa)
	appl1	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (650 aa)
	napepld	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. (449 aa)
	dagla	Diacylglycerol lipase, alpha. (1087 aa)
	STX7	Syntaxin 7; Belongs to the syntaxin family. (255 aa)
	cmtm6	MARVEL domain-containing protein. (180 aa)
	ENSFHEP00000034358	RING-type domain-containing protein. (201 aa)
	ubxn6	UBX domain protein 6. (437 aa)
	LOC105920855	Uncharacterized protein. (358 aa)
	ENSFHEP00000035067	Zinc finger, FYVE domain containing 9b. (376 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000012478	ENSFHEP00000026378	ENSFHEP00000012478	ENSFHEP00000026378	LITAF domain-containing protein.	LITAF domain-containing protein.	0.699
ENSFHEP00000012478	LOC105917092	ENSFHEP00000012478	ENSFHEP00000009316	LITAF domain-containing protein.	Si:ch211-202h22.8.	0.713
ENSFHEP00000012478	LOC105920057	ENSFHEP00000012478	ENSFHEP00000008039	LITAF domain-containing protein.	LITAF domain-containing protein.	0.707
ENSFHEP00000012478	LOC110366401	ENSFHEP00000012478	ENSFHEP00000012659	LITAF domain-containing protein.	LITAF domain-containing protein.	0.698
ENSFHEP00000019842	ENSFHEP00000027833	ENSFHEP00000019842	ENSFHEP00000027833	Syntaxin 12; Belongs to the syntaxin family.	VPS41 subunit of HOPS complex.	0.901
ENSFHEP00000019842	LOC105915268	ENSFHEP00000019842	ENSFHEP00000003800	Syntaxin 12; Belongs to the syntaxin family.	Vesicle-associated membrane protein 8 (endobrevin).	0.935
ENSFHEP00000019842	LOC105933269	ENSFHEP00000019842	ENSFHEP00000003816	Syntaxin 12; Belongs to the syntaxin family.	V-SNARE coiled-coil homology domain-containing protein.	0.935
ENSFHEP00000019842	gripap1	ENSFHEP00000019842	ENSFHEP00000000210	Syntaxin 12; Belongs to the syntaxin family.	GRIP1 associated protein 1.	0.474
ENSFHEP00000019842	hgs	ENSFHEP00000019842	ENSFHEP00000029644	Syntaxin 12; Belongs to the syntaxin family.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.533
ENSFHEP00000019842	snx3	ENSFHEP00000019842	ENSFHEP00000000132	Syntaxin 12; Belongs to the syntaxin family.	Sorting nexin 3.	0.480
ENSFHEP00000019842	vti1b	ENSFHEP00000019842	ENSFHEP00000004272	Syntaxin 12; Belongs to the syntaxin family.	Vesicle transport through interaction with t-SNAREs 1B.	0.947
ENSFHEP00000026378	ENSFHEP00000012478	ENSFHEP00000026378	ENSFHEP00000012478	LITAF domain-containing protein.	LITAF domain-containing protein.	0.699
ENSFHEP00000027833	ENSFHEP00000019842	ENSFHEP00000027833	ENSFHEP00000019842	VPS41 subunit of HOPS complex.	Syntaxin 12; Belongs to the syntaxin family.	0.901
ENSFHEP00000027833	LOC105915268	ENSFHEP00000027833	ENSFHEP00000003800	VPS41 subunit of HOPS complex.	Vesicle-associated membrane protein 8 (endobrevin).	0.957
ENSFHEP00000027833	LOC105920855	ENSFHEP00000027833	ENSFHEP00000034962	VPS41 subunit of HOPS complex.	Uncharacterized protein.	0.649
ENSFHEP00000027833	LOC105930418	ENSFHEP00000027833	ENSFHEP00000012581	VPS41 subunit of HOPS complex.	RAB5A, member RAS oncogene family, a.	0.649
ENSFHEP00000027833	LOC105933269	ENSFHEP00000027833	ENSFHEP00000003816	VPS41 subunit of HOPS complex.	V-SNARE coiled-coil homology domain-containing protein.	0.957
ENSFHEP00000027833	LOC105935780	ENSFHEP00000027833	ENSFHEP00000000990	VPS41 subunit of HOPS complex.	RAB5B, member RAS oncogene family.	0.649
ENSFHEP00000027833	LOC105939972	ENSFHEP00000027833	ENSFHEP00000030138	VPS41 subunit of HOPS complex.	Uncharacterized protein.	0.649
ENSFHEP00000027833	STX7	ENSFHEP00000027833	ENSFHEP00000033533	VPS41 subunit of HOPS complex.	Syntaxin 7; Belongs to the syntaxin family.	0.901