17 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dkc1	Dyskeratosis congenita 1, dyskerin. (533 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1576 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (488 aa)
	pnkp	Polynucleotide kinase 3'-phosphatase. (596 aa)
	cct3	T-complex protein 1 subunit gamma. (540 aa)
	LOC105917506	Uncharacterized protein. (606 aa)
	atr	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2414 aa)
	fbxo4	F-box protein 4. (390 aa)
	cct5	Chaperonin containing TCP1, subunit 5 (epsilon). (554 aa)
	pot1	Protection of telomeres 1 homolog. (795 aa)
	ENSFHEP00000020833	Uncharacterized protein. (136 aa)
	xrcc5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (732 aa)
	ENSFHEP00000032812	Uncharacterized protein. (83 aa)
	mapkapk5	Protein kinase domain-containing protein. (440 aa)
	nek2	Serine/threonine-protein kinase Nek2. (445 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (423 aa)
	ENSFHEP00000034851	TAN domain-containing protein. (173 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000020833	ENSFHEP00000034851	ENSFHEP00000020833	ENSFHEP00000034851	Uncharacterized protein.	TAN domain-containing protein.	0.923
ENSFHEP00000020833	atr	ENSFHEP00000020833	ENSFHEP00000015732	Uncharacterized protein.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.991
ENSFHEP00000020833	xrcc5	ENSFHEP00000020833	ENSFHEP00000025953	Uncharacterized protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.913
ENSFHEP00000034851	ENSFHEP00000020833	ENSFHEP00000034851	ENSFHEP00000020833	TAN domain-containing protein.	Uncharacterized protein.	0.923
ENSFHEP00000034851	atr	ENSFHEP00000034851	ENSFHEP00000015732	TAN domain-containing protein.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.991
ENSFHEP00000034851	xrcc5	ENSFHEP00000034851	ENSFHEP00000025953	TAN domain-containing protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.913
LOC105917506	dkc1	ENSFHEP00000015452	ENSFHEP00000003722	Uncharacterized protein.	Dyskeratosis congenita 1, dyskerin.	0.686
LOC105917506	pot1	ENSFHEP00000015452	ENSFHEP00000018153	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.993
atr	ENSFHEP00000020833	ENSFHEP00000015732	ENSFHEP00000020833	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.991
atr	ENSFHEP00000034851	ENSFHEP00000015732	ENSFHEP00000034851	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	TAN domain-containing protein.	0.991
atr	xrcc5	ENSFHEP00000015732	ENSFHEP00000025953	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.692
cct2	cct3	ENSFHEP00000011967	ENSFHEP00000015431	Chaperonin containing TCP1, subunit 2 (beta).	T-complex protein 1 subunit gamma.	0.999
cct2	cct5	ENSFHEP00000011967	ENSFHEP00000017351	Chaperonin containing TCP1, subunit 2 (beta).	Chaperonin containing TCP1, subunit 5 (epsilon).	0.999
cct3	cct2	ENSFHEP00000015431	ENSFHEP00000011967	T-complex protein 1 subunit gamma.	Chaperonin containing TCP1, subunit 2 (beta).	0.999
cct3	cct5	ENSFHEP00000015431	ENSFHEP00000017351	T-complex protein 1 subunit gamma.	Chaperonin containing TCP1, subunit 5 (epsilon).	0.999
cct5	cct2	ENSFHEP00000017351	ENSFHEP00000011967	Chaperonin containing TCP1, subunit 5 (epsilon).	Chaperonin containing TCP1, subunit 2 (beta).	0.999
cct5	cct3	ENSFHEP00000017351	ENSFHEP00000015431	Chaperonin containing TCP1, subunit 5 (epsilon).	T-complex protein 1 subunit gamma.	0.999
dkc1	LOC105917506	ENSFHEP00000003722	ENSFHEP00000015452	Dyskeratosis congenita 1, dyskerin.	Uncharacterized protein.	0.686
dkc1	pot1	ENSFHEP00000003722	ENSFHEP00000018153	Dyskeratosis congenita 1, dyskerin.	Protection of telomeres 1 homolog.	0.748
pnkp	xrcc5	ENSFHEP00000015143	ENSFHEP00000025953	Polynucleotide kinase 3'-phosphatase.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.631