STRINGSTRING
ppp1r21 ppp1r21 rab33b rab33b TMEM19 TMEM19 rab4a rab4a LOC105927564 LOC105927564 rab21 rab21 RAB9A RAB9A RAB39B RAB39B RAB9A-2 RAB9A-2 LOC105927693 LOC105927693 rab12 rab12 rab35 rab35 ENSFHEP00000026514 ENSFHEP00000026514 rab30 rab30 LOC105938887 LOC105938887 LOC105936561 LOC105936561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppp1r21Protein phosphatase 1, regulatory subunit 21. (788 aa)
rab33bRAB33B, member RAS oncogene family a. (240 aa)
TMEM19Transmembrane protein 19. (342 aa)
rab4aRAB4a, member RAS oncogene family. (213 aa)
LOC105927564Zgc:101559. (234 aa)
rab21RAB21, member RAS oncogene family. (218 aa)
RAB9ARAB9A, member RAS oncogene family. (215 aa)
RAB39BRAB39B, member RAS oncogene family. (213 aa)
RAB9A-2RAB9A, member RAS oncogene family. (202 aa)
LOC105927693RAB33A, member RAS oncogene family. (239 aa)
rab12RAB12, member RAS oncogene family. (245 aa)
rab35RAB35, member RAS oncogene family b. (201 aa)
ENSFHEP00000026514RAB9B, member RAS oncogene family. (220 aa)
rab30RAB30, member RAS oncogene family. (203 aa)
LOC105938887Si:dkey-16l2.16. (162 aa)
LOC105936561RAB4B, member RAS oncogene family. (213 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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