STRINGSTRING
gtf2h3 gtf2h3 rb1 rb1 cdk13 cdk13 gtf2h1 gtf2h1 ccnk ccnk mnat1 mnat1 ccnt1 ccnt1 ENSFHEP00000011438 ENSFHEP00000011438 ENSFHEP00000020929 ENSFHEP00000020929 gtf2h5 gtf2h5 ercc2 ercc2 ccnt2 ccnt2 ercc3 ercc3 ccnh ccnh LOC105932535 LOC105932535 gtf2h4 gtf2h4 ENSFHEP00000034932 ENSFHEP00000034932
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h3General transcription factor IIH, polypeptide 3. (300 aa)
rb1Retinoblastoma-associated protein. (913 aa)
cdk13Cyclin-dependent kinase 13. (1445 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
ccnkCyclin K; Belongs to the cyclin family. (523 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
ccnt1Cyclin-T1; Belongs to the cyclin family. (681 aa)
ENSFHEP00000011438Cyclin-dependent kinase 12; Belongs to the protein kinase superfamily. (455 aa)
ENSFHEP00000020929General transcription factor IIH, polypeptide 2. (212 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit. (795 aa)
ccnt2Cyclin-T2; Belongs to the cyclin family. (697 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
LOC105932535Cyclin T2b; Belongs to the cyclin family. (550 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (474 aa)
ENSFHEP00000034932Ssl1 domain-containing protein. (178 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.