STRINGSTRING
snrpd3 snrpd3 ENSFHEP00000012172 ENSFHEP00000012172 snrpe snrpe snrpd2 snrpd2 snrpf snrpf clns1a clns1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
ENSFHEP00000012172Small nuclear ribonucleoprotein D1 polypeptide. (82 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (137 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
snrpfSmall nuclear ribonucleoprotein polypeptide F. (114 aa)
clns1aChloride channel, nucleotide-sensitive, 1A. (249 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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