(9 nodes) Seh1-associated complex network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	depdc5	DEP domain containing 5. (883 aa)
	wdr59	WD repeat domain 59. (941 aa)
	nprl2	NPR2 like, GATOR1 complex subunit. (274 aa)
	ENSFHEP00000017412	Uncharacterized protein. (55 aa)
	ENSFHEP00000017385	Uncharacterized protein. (57 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	nprl3	Nitrogen permease regulator 3-like protein. (599 aa)
	wdr24	WD repeat domain 24. (706 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000017385	depdc5	ENSFHEP00000017385	ENSFHEP00000005599	Uncharacterized protein.	DEP domain containing 5.	0.996
ENSFHEP00000017385	nprl3	ENSFHEP00000017385	ENSFHEP00000001816	Uncharacterized protein.	Nitrogen permease regulator 3-like protein.	0.996
ENSFHEP00000017385	sec13	ENSFHEP00000017385	ENSFHEP00000014441	Uncharacterized protein.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.989
ENSFHEP00000017385	seh1l	ENSFHEP00000017385	ENSFHEP00000017046	Uncharacterized protein.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.996
ENSFHEP00000017385	wdr24	ENSFHEP00000017385	ENSFHEP00000000983	Uncharacterized protein.	WD repeat domain 24.	0.996
ENSFHEP00000017385	wdr59	ENSFHEP00000017385	ENSFHEP00000025365	Uncharacterized protein.	WD repeat domain 59.	0.996
ENSFHEP00000017412	depdc5	ENSFHEP00000017412	ENSFHEP00000005599	Uncharacterized protein.	DEP domain containing 5.	0.979
ENSFHEP00000017412	nprl3	ENSFHEP00000017412	ENSFHEP00000001816	Uncharacterized protein.	Nitrogen permease regulator 3-like protein.	0.979
ENSFHEP00000017412	sec13	ENSFHEP00000017412	ENSFHEP00000014441	Uncharacterized protein.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.936
ENSFHEP00000017412	seh1l	ENSFHEP00000017412	ENSFHEP00000017046	Uncharacterized protein.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.979
ENSFHEP00000017412	wdr24	ENSFHEP00000017412	ENSFHEP00000000983	Uncharacterized protein.	WD repeat domain 24.	0.979
ENSFHEP00000017412	wdr59	ENSFHEP00000017412	ENSFHEP00000025365	Uncharacterized protein.	WD repeat domain 59.	0.979
depdc5	ENSFHEP00000017385	ENSFHEP00000005599	ENSFHEP00000017385	DEP domain containing 5.	Uncharacterized protein.	0.996
depdc5	ENSFHEP00000017412	ENSFHEP00000005599	ENSFHEP00000017412	DEP domain containing 5.	Uncharacterized protein.	0.979
depdc5	nprl2	ENSFHEP00000005599	ENSFHEP00000017420	DEP domain containing 5.	NPR2 like, GATOR1 complex subunit.	0.996
depdc5	nprl3	ENSFHEP00000005599	ENSFHEP00000001816	DEP domain containing 5.	Nitrogen permease regulator 3-like protein.	0.999
depdc5	sec13	ENSFHEP00000005599	ENSFHEP00000014441	DEP domain containing 5.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.998
depdc5	seh1l	ENSFHEP00000005599	ENSFHEP00000017046	DEP domain containing 5.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.998
depdc5	wdr24	ENSFHEP00000005599	ENSFHEP00000000983	DEP domain containing 5.	WD repeat domain 24.	0.999
depdc5	wdr59	ENSFHEP00000005599	ENSFHEP00000025365	DEP domain containing 5.	WD repeat domain 59.	0.999