STRINGSTRING
LOC105915406 LOC105915406 pik3r4 pik3r4 LOC105928170 LOC105928170 atg14 atg14 LOC105933547 LOC105933547 LOC105933078 LOC105933078 ambra1 ambra1 ENSFHEP00000010079 ENSFHEP00000010079
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105915406Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (561 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1334 aa)
LOC105928170SCY domain-containing protein. (110 aa)
atg14Autophagy related 14. (508 aa)
LOC105933547Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (523 aa)
LOC105933078Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
ambra1Autophagy/beclin-1 regulator 1b. (769 aa)
ENSFHEP00000010079Uncharacterized protein. (897 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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