STRINGSTRING
gja1 gja1 LOC105936874 LOC105936874 LOC105916552 LOC105916552 LOC105925123 LOC105925123 ENSFHEP00000011452 ENSFHEP00000011452 LOC105930123 LOC105930123 afdn afdn ENSFHEP00000005656 ENSFHEP00000005656 fermt2 fermt2 gja5 gja5 CDH2 CDH2 cxadr cxadr LOC105931563 LOC105931563 LOC105928223 LOC105928223 ENSFHEP00000026549 ENSFHEP00000026549 FGFRL1 FGFRL1 scn4b scn4b LOC105917287 LOC105917287 LOC105929354 LOC105929354 LOC105919124 LOC105919124 nectin1 nectin1 ajap1 ajap1 ctnnb1 ctnnb1 LOC105916916 LOC105916916
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gja1Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (387 aa)
LOC105936874Vinculin a. (1126 aa)
LOC105916552Uncharacterized protein. (2218 aa)
LOC105925123Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (471 aa)
ENSFHEP00000011452Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (405 aa)
LOC105930123Junctional adhesion molecule 3b. (349 aa)
afdnAfadin, adherens junction formation factor a. (1860 aa)
ENSFHEP00000005656Fibroblast growth factor receptor like 1a. (438 aa)
fermt2Fermitin family member 2. (638 aa)
gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (380 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (905 aa)
cxadrCXADR Ig-like cell adhesion molecule. (383 aa)
LOC105931563Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (529 aa)
LOC105928223Vinculin b. (1066 aa)
ENSFHEP00000026549LIM zinc-binding domain-containing protein. (112 aa)
FGFRL1Fibroblast growth factor receptor like 1. (494 aa)
scn4bSodium channel, voltage-gated, type IV, beta a. (233 aa)
LOC105917287Junction plakoglobin a. (722 aa)
LOC105929354Sodium channel, voltage-gated, type IV, beta b. (219 aa)
LOC105919124Sodium channel, voltage-gated, type I, beta a. (225 aa)
nectin1Nectin cell adhesion molecule 1b. (516 aa)
ajap1Adherens junctions associated protein 1. (375 aa)
ctnnb1Catenin (cadherin-associated protein), beta 1. (783 aa)
LOC105916916Ig-like domain-containing protein. (222 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.