(15 nodes) Regulation of T-helper cell differentiation network (Fundulus heteroclitus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	LOC105936849	Mucosa-associated lymphoid tissue lymphoma translocation protein 1. (823 aa)
	rc3h1	Ring finger and CCCH-type domains 1b. (1168 aa)
	LOC105928170	SCY domain-containing protein. (110 aa)
	rc3h2	Ring finger and CCCH-type domains 2. (1122 aa)
	myb	V-myb avian myeloblastosis viral oncogene homolog. (588 aa)
	hlx	H2.0-like homeo box 1 (Drosophila). (394 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (618 aa)
	LOC105921986	Si:dkey-206d17.12. (588 aa)
	LOC105932356	MALT paracaspase 3. (653 aa)
	malt1	Mucosa-associated lymphoid tissue lymphoma translocation protein 1. (830 aa)
	tbx21	T-box transcription factor 21. (614 aa)
	LOC105932162	NACHT, LRR and PYD domains-containing protein 14. (930 aa)
	nfkbid	ANK_REP_REGION domain-containing protein. (403 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (576 aa)
	LOC105937422	Uncharacterized protein. (258 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105921986	rc3h1	ENSFHEP00000000459	ENSFHEP00000032263	Si:dkey-206d17.12.	Ring finger and CCCH-type domains 1b.	0.424
LOC105932162	LOC105937422	ENSFHEP00000006563	ENSFHEP00000021380	NACHT, LRR and PYD domains-containing protein 14.	Uncharacterized protein.	0.491
LOC105932162	ripk2	ENSFHEP00000006563	ENSFHEP00000015251	NACHT, LRR and PYD domains-containing protein 14.	Receptor-interacting serine-threonine kinase 2.	0.519
LOC105932356	LOC105936849	ENSFHEP00000001732	ENSFHEP00000023309	MALT paracaspase 3.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.946
LOC105932356	malt1	ENSFHEP00000001732	ENSFHEP00000003226	MALT paracaspase 3.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.948
LOC105936849	LOC105932356	ENSFHEP00000023309	ENSFHEP00000001732	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	MALT paracaspase 3.	0.946
LOC105936849	malt1	ENSFHEP00000023309	ENSFHEP00000003226	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.954
LOC105937422	LOC105932162	ENSFHEP00000021380	ENSFHEP00000006563	Uncharacterized protein.	NACHT, LRR and PYD domains-containing protein 14.	0.491
hlx	tbx21	ENSFHEP00000034971	ENSFHEP00000005131	H2.0-like homeo box 1 (Drosophila).	T-box transcription factor 21.	0.586
malt1	LOC105932356	ENSFHEP00000003226	ENSFHEP00000001732	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	MALT paracaspase 3.	0.948
malt1	LOC105936849	ENSFHEP00000003226	ENSFHEP00000023309	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.954
rc3h1	LOC105921986	ENSFHEP00000032263	ENSFHEP00000000459	Ring finger and CCCH-type domains 1b.	Si:dkey-206d17.12.	0.424
rc3h1	rc3h2	ENSFHEP00000032263	ENSFHEP00000028276	Ring finger and CCCH-type domains 1b.	Ring finger and CCCH-type domains 2.	0.793
rc3h1	zc3h12a	ENSFHEP00000032263	ENSFHEP00000000304	Ring finger and CCCH-type domains 1b.	Zinc finger CCCH-type containing 12A.	0.424
rc3h2	rc3h1	ENSFHEP00000028276	ENSFHEP00000032263	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.793
ripk2	LOC105932162	ENSFHEP00000015251	ENSFHEP00000006563	Receptor-interacting serine-threonine kinase 2.	NACHT, LRR and PYD domains-containing protein 14.	0.519
tbx21	hlx	ENSFHEP00000005131	ENSFHEP00000034971	T-box transcription factor 21.	H2.0-like homeo box 1 (Drosophila).	0.586
zc3h12a	rc3h1	ENSFHEP00000000304	ENSFHEP00000032263	Zinc finger CCCH-type containing 12A.	Ring finger and CCCH-type domains 1b.	0.424