STRINGSTRING
mgrn1 mgrn1 ptch2 ptch2 ENSFHEP00000017921 ENSFHEP00000017921 gpc3 gpc3 MOSMO MOSMO LOC105929235 LOC105929235 ENSFHEP00000009221 ENSFHEP00000009221 kif7 kif7 prkacb prkacb rb1 rb1 IFT122 IFT122 serpine2 serpine2 LOC105939479 LOC105939479 rest rest LOC105932051 LOC105932051 gpr161 gpr161 LOC105935432 LOC105935432 glis2 glis2 ulk3 ulk3 rfx4 rfx4 hhip hhip
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mgrn1Mahogunin, ring finger 1b. (548 aa)
ptch2Patched 2. (1299 aa)
ENSFHEP00000017921Growth arrest-specific 1b. (243 aa)
gpc3Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (541 aa)
MOSMOModulator of smoothened. (167 aa)
LOC105929235Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (334 aa)
ENSFHEP00000009221Uncharacterized protein. (268 aa)
kif7Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1227 aa)
prkacbUncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
rb1Retinoblastoma-associated protein. (913 aa)
IFT122Intraflagellar transport 122. (1079 aa)
serpine2Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (449 aa)
LOC105939479GLIS family zinc finger 2. (496 aa)
restRE1-silencing transcription factor. (906 aa)
LOC105932051Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (377 aa)
gpr161G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (528 aa)
LOC105935432Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily. (351 aa)
glis2GLIS family zinc finger 2b. (486 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (469 aa)
rfx4Transcription factor RFX4. (737 aa)
hhipHedgehog interacting protein. (739 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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