17 items (Fundulus heteroclitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ubtf	Upstream binding transcription factor. (738 aa)
	lyar	Ly1 antibody reactive. (333 aa)
	eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3. (1136 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2495 aa)
	dhx33	DEAH (Asp-Glu-Ala-His) box polypeptide 33. (643 aa)
	pwp1	PWP1 homolog, endonuclein. (488 aa)
	rasl11a	RAS-like, family 11, member A. (287 aa)
	ENSFHEP00000017928	U3snoRNP10 domain-containing protein. (323 aa)
	LOC105926275	Protein phosphatase 1, regulatory subunit 15B. (553 aa)
	wdr43	WD repeat domain 43. (652 aa)
	utp15	UTP15 small subunit processome component. (528 aa)
	wdr75	WD repeat domain 75. (800 aa)
	ENSFHEP00000030619	HMG box domain-containing protein. (153 aa)
	mars1	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (926 aa)
	nol11	Nucleolar protein 11. (721 aa)
	ENSFHEP00000032939	BP28CT domain-containing protein. (348 aa)
	ENSFHEP00000034334	HMG box domain-containing protein. (211 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFHEP00000017928	ENSFHEP00000032939	ENSFHEP00000017928	ENSFHEP00000032939	U3snoRNP10 domain-containing protein.	BP28CT domain-containing protein.	0.900
ENSFHEP00000017928	dhx33	ENSFHEP00000017928	ENSFHEP00000012716	U3snoRNP10 domain-containing protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	0.767
ENSFHEP00000017928	nol11	ENSFHEP00000017928	ENSFHEP00000031130	U3snoRNP10 domain-containing protein.	Nucleolar protein 11.	0.936
ENSFHEP00000017928	pwp1	ENSFHEP00000017928	ENSFHEP00000016933	U3snoRNP10 domain-containing protein.	PWP1 homolog, endonuclein.	0.665
ENSFHEP00000017928	utp15	ENSFHEP00000017928	ENSFHEP00000024992	U3snoRNP10 domain-containing protein.	UTP15 small subunit processome component.	0.996
ENSFHEP00000017928	wdr43	ENSFHEP00000017928	ENSFHEP00000019961	U3snoRNP10 domain-containing protein.	WD repeat domain 43.	0.995
ENSFHEP00000017928	wdr75	ENSFHEP00000017928	ENSFHEP00000027109	U3snoRNP10 domain-containing protein.	WD repeat domain 75.	0.998
ENSFHEP00000032939	ENSFHEP00000017928	ENSFHEP00000032939	ENSFHEP00000017928	BP28CT domain-containing protein.	U3snoRNP10 domain-containing protein.	0.900
ENSFHEP00000032939	dhx33	ENSFHEP00000032939	ENSFHEP00000012716	BP28CT domain-containing protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	0.767
ENSFHEP00000032939	nol11	ENSFHEP00000032939	ENSFHEP00000031130	BP28CT domain-containing protein.	Nucleolar protein 11.	0.936
ENSFHEP00000032939	pwp1	ENSFHEP00000032939	ENSFHEP00000016933	BP28CT domain-containing protein.	PWP1 homolog, endonuclein.	0.665
ENSFHEP00000032939	utp15	ENSFHEP00000032939	ENSFHEP00000024992	BP28CT domain-containing protein.	UTP15 small subunit processome component.	0.996
ENSFHEP00000032939	wdr43	ENSFHEP00000032939	ENSFHEP00000019961	BP28CT domain-containing protein.	WD repeat domain 43.	0.995
ENSFHEP00000032939	wdr75	ENSFHEP00000032939	ENSFHEP00000027109	BP28CT domain-containing protein.	WD repeat domain 75.	0.998
dhx33	ENSFHEP00000017928	ENSFHEP00000012716	ENSFHEP00000017928	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	U3snoRNP10 domain-containing protein.	0.767
dhx33	ENSFHEP00000032939	ENSFHEP00000012716	ENSFHEP00000032939	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	BP28CT domain-containing protein.	0.767
dhx33	pwp1	ENSFHEP00000012716	ENSFHEP00000016933	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	PWP1 homolog, endonuclein.	0.461
dhx33	utp15	ENSFHEP00000012716	ENSFHEP00000024992	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	UTP15 small subunit processome component.	0.806
dhx33	wdr43	ENSFHEP00000012716	ENSFHEP00000019961	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	WD repeat domain 43.	0.916
dhx33	wdr75	ENSFHEP00000012716	ENSFHEP00000027109	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	WD repeat domain 75.	0.843